| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2505 |
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| Symbol | |
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| ID | 5323372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2602890 |
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| End bp | 2604410 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640791447 |
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| Product | ABC transporter related |
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| Protein accession | YP_001328170 |
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| Protein GI | 150397703 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.222915 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCTGA TCACGACAAG AAATCTCGGT GTCACTATGG GTGCGCCGCT CTTTTCGCAA
CTTGACCTCG CAATCTCGCC CGGCGATCGC ATCGGCATCG TCGCCGCCAA TGGCAGAGGA
AAATCGACCC TTCTGAGATG CATCGCCGGC GCGCTCGATG CGACAACCGG CGACGTCATT
CGCGCACGAG GCCTGCGCAT CGGTCATGTC GAGCAGTCGA TCCCGCCCGG CCTTTCTGAA
ATTCGGTTCC GCGACGCAGT CCGCCAGGCA TTGCCGGACG AACAGGCCCA AACGGAGGAC
TGGCGGGTTG ACGTCGCCTT GGACTCACTC GACGTTCCGC AGGCGCTGCG TCAACGGCCG
ATCGGACGAT TGAGCGGCGG CTGGCAAGGA TTGGCGCTGC TTGCACGTGT CTTCGTTACC
GACCCGGACG CGCTGCTTCT GGACGAGCCG ACGAACCACC TGGATCTTGA AAAAATCCTC
AGGCTCGAGA CGTGGCTCCT GAACCTACCC CGTGACATGC CGGTGCTGAT CGCGAGCCAC
GATCGGGCGT TTCTTGATGC GACCACCAAT CGGACGTTGT TTCTGCGCGC GGAGCAGTCG
TACGCGTTTT CGCTGCCCTA TTCGCGGGCA CGAAACGCAT TGGACGAGAT CGACGCTTCC
GACGAGCGAC GGTACCGAAA GGACATGAAA ACGGTTCAGC AGCTTCGCCG CCAGGCAGCC
AAGCTCAATA ATATCGGCAT CAATTCCGGC AGCGACCTGC TGACGGTAAA GACGAAACAA
ATTCGTCAAA GGGCAGAACG GCTGGAGGAT GCTGCACGCC CCGCCTTTCA CGAGCGATCG
TCCGGCGCGA TCCGGCTCGC CAATCGGGGC ACGCACGCCA AGGTTCTCAT CACGCTCGAC
GATACGCCGG TTGAAACGCC GCAGGGAACT TTGCTGTTCA GGACGGGCAG GCAATGGATT
CGCCATGGTG ACCGGATCGT TCTTCTCGGT CGAAATGGTG CGGGCAAGTC GCGCCTCGTC
CATCTGATCA GGACTGCGAT CGCAGAGCCG GAAAATCCGG AGGCAACGAT CAAGGCGACG
CCATCATTGA TGCTCGGTTA CAGCGATCAG GCGCTCGCAG AACTCGCGGG CGATGAGACG
CCGCTCACTA CGATAACGCG GCGCTTCGAG ATCGGCGACC AACGCGCCCG CACCCTGCTG
GTCGGCGCCG GCCTCGGGAT CGAGCTGCAA ACTCGCCCCG TCGGCGTTCT TTCCGGCGGG
CAGAAGTCCC GCTTGGCAAT GCTCGTGCTG AGGCTCACCA ATCCGAACTT CTATCTGCTC
GACGAACCAA CCAACCATCT CGACATCGAG GGCCAGGAGG CCCTGGAAAC GGAGTTGACG
GCGCAGAAAG CGAGTTGCCT GCTGGTGTCG CACGACCGCA GTTTCGCGCG GGCAGTCGGC
AACCGTTTCT GGCTGATCGA GAATCGCCGT TTGCTTGAAG TCGGCGATCC CGATGACTTC
TTCAAAGGCC TTCGTGAGTG A
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| Protein sequence | MALITTRNLG VTMGAPLFSQ LDLAISPGDR IGIVAANGRG KSTLLRCIAG ALDATTGDVI
RARGLRIGHV EQSIPPGLSE IRFRDAVRQA LPDEQAQTED WRVDVALDSL DVPQALRQRP
IGRLSGGWQG LALLARVFVT DPDALLLDEP TNHLDLEKIL RLETWLLNLP RDMPVLIASH
DRAFLDATTN RTLFLRAEQS YAFSLPYSRA RNALDEIDAS DERRYRKDMK TVQQLRRQAA
KLNNIGINSG SDLLTVKTKQ IRQRAERLED AARPAFHERS SGAIRLANRG THAKVLITLD
DTPVETPQGT LLFRTGRQWI RHGDRIVLLG RNGAGKSRLV HLIRTAIAEP ENPEATIKAT
PSLMLGYSDQ ALAELAGDET PLTTITRRFE IGDQRARTLL VGAGLGIELQ TRPVGVLSGG
QKSRLAMLVL RLTNPNFYLL DEPTNHLDIE GQEALETELT AQKASCLLVS HDRSFARAVG
NRFWLIENRR LLEVGDPDDF FKGLRE
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