| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2479 |
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| Symbol | |
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| ID | 5323340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2561742 |
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| End bp | 2563736 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640791417 |
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| Product | transketolase |
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| Protein accession | YP_001328146 |
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| Protein GI | 150397679 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCACC GCCGTGAACT GGCGAACGCA ATTCGTTTCC TGACTGTCGA CGTCGTGCAG
AAGGCCAATT CCGGCCATCC CGGGACCGCA ATGGGCATGG CGGATATTGC CGAGGTGCTT
TGGAACGATT TTCTCAGGCA CAATCCGGTC AATCCGAGAT GGATCAACCG TGACCGTTTC
GTTCAGTCGA ACGGGCATGG TTCGATGCTG ACCTATTCGC TGCTGCATCT CTCCGGCTAC
GGGGTGACGA TTCAGGATTT GAAAGATCAT CGAAAGCTGC ATTCGAAGAC GCCGGGCCAT
CCGGAATACG GCGTGACGGC CGGAGTCGAG ACGACCACCG GTCCGCTTGG CCAGGGCTTC
GCCACGGCGG TCGGAATGGC TCTGGCGGAA AAGAAGCTGG CGCAGGAGTT CAACCGCGCC
GGTTTCCCCA TAGTCGATCA CTTCACTTAC GTTTTCGTTG GGGACGGCTG CCTCATGGAG
GGGGTCGCGC AGGAGGCAGC CTCGCTTGCC GGTACTTTGA AGCTCAACAA GCTGGTCGCT
GTCTATGACG ACAACAAGAT CTCCATCGAC GGCGAGACGC CCGGCTGGTT CGCCGACGAT
AGCGCCGCTC GTTTCCGTGC GCTCGGCTGG AACGTCATTG CGGATGTGGA CGGCCATGAT
GCCGGCGCCA TCGCCGCGGC ATTTGCCGCT GCCCGCCAGT CGCAGGACAG GCCGACCATG
ATCTGCTGCA AGACGGTGAT CGGTTATGGC TCGCCGAACA AGCAGGGCAA GGAAGAGGTG
CATGGCGCAC CGCTCGGCGT GGAAGAAGTG GCGCGCACCC GCGAGCACCT CGGCTGGGCT
CATGAGGCTT TCATCGTGCC GGACGCCGTG ATGCAGGCCT GGGATGCCCG TCCGCGCGGC
GAAAAAGCGG AAGCCGAATG GAGGACCCTT TTCGAGCGTT ACAGAACAAA GCATCCGGAT
CTTGCGGCCG AACTGGAACG CCGTAGCGCC GGGCGGCTTC CGGACGGTTT CGACGCGGCC
TTTGCGCGCG AGGCCGATCG CATTCTTGGC GGCGAGCCGA TCAGGCAGCC GATCCGCAAG
GCTTCGAACC GCGTCCTCGG CAATTTGCTT GAAGGCCTCC CGGAAGTGAT CGGTGGTTCC
GCCGATGTTT CCGTGTCGAC GCTGGCATGG ACCAGTGCAG CCCGCTCCAT CACGCCGGAC
GATTTTTCAG GGAATTTCGT GCATTACGGC GTGCGGGAGT TCGGCATGTC CGCCATGATG
AACGGTATGG CCGCCCATGG CGGTCTCATT CCCTACGGTG CCTGTTATCT CGTCTTCAGC
GACTATAGCC GCAATGCCGT GCGCCTTTCG GCCCTGATGG GTCTCAAGGC GATCTTTCTC
TACACGCATG ATTCGGTCGG TGTCGGCGAG GACGGACCGA CGCACCAGCC CTGCGAGCAG
CTCGTGGCGC TCCGCGCTGT TCCCAACATG TCGCTGTGGC GGCCGGGCAG CGAGCTGGAA
GCGCTTGTTG CCTGGGAATC CGCTTTGAAG CGCGAGGGGC CTAGCGTGAT CGTCGCCGCG
CGCCAGGAAG GTGGGGTGTT TGCGCACGAA AGCAGCGACA TCGACGGCAT CCGCCGCGGC
GGGTACGTGC TGAAGGATTC CGGCGCCAAA CCGGACATCG TCCTTGCTGC GACCGGATCG
GAGATCGGCC TCATCCTCGA AGCGGCGGCA GTACTGGAGG AGCAAGGCAA AGCGGTGCGG
CTGGCTTCCA TTCCCAACGG CAATCTCTTC GCACGGCAGG ACCGCGGCTA TCAGGAAAGC
GTCCTGGCTT TCGGCACGCC GACGGTTTTC GTGGAGGCTG CATCGCCGCT TTATTGGTAC
CAGTTCCTCA AGGGACCGGG TACGGTGGTC GGTGTGGATC GTTTCGGCGA ATCAGCGCCC
GGACCGGAGA TCTATCGCGT CATGAACCTG ACGGCCGAGC GGATCGTGTC CGAGGCCAGT
CAACTCTTGC GCTGA
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| Protein sequence | MFHRRELANA IRFLTVDVVQ KANSGHPGTA MGMADIAEVL WNDFLRHNPV NPRWINRDRF
VQSNGHGSML TYSLLHLSGY GVTIQDLKDH RKLHSKTPGH PEYGVTAGVE TTTGPLGQGF
ATAVGMALAE KKLAQEFNRA GFPIVDHFTY VFVGDGCLME GVAQEAASLA GTLKLNKLVA
VYDDNKISID GETPGWFADD SAARFRALGW NVIADVDGHD AGAIAAAFAA ARQSQDRPTM
ICCKTVIGYG SPNKQGKEEV HGAPLGVEEV ARTREHLGWA HEAFIVPDAV MQAWDARPRG
EKAEAEWRTL FERYRTKHPD LAAELERRSA GRLPDGFDAA FAREADRILG GEPIRQPIRK
ASNRVLGNLL EGLPEVIGGS ADVSVSTLAW TSAARSITPD DFSGNFVHYG VREFGMSAMM
NGMAAHGGLI PYGACYLVFS DYSRNAVRLS ALMGLKAIFL YTHDSVGVGE DGPTHQPCEQ
LVALRAVPNM SLWRPGSELE ALVAWESALK REGPSVIVAA RQEGGVFAHE SSDIDGIRRG
GYVLKDSGAK PDIVLAATGS EIGLILEAAA VLEEQGKAVR LASIPNGNLF ARQDRGYQES
VLAFGTPTVF VEAASPLYWY QFLKGPGTVV GVDRFGESAP GPEIYRVMNL TAERIVSEAS
QLLR
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