Gene Smed_2467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2467 
Symbol 
ID5323328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2548204 
End bp2549082 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content64% 
IMG OID640791405 
Producthypothetical protein 
Protein accessionYP_001328134 
Protein GI150397667 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCCGC CCTCATCCAT GCCGTTTTTG GAATCGCCGT TTTCAGAACC GCTCGCCGAG 
CGGCTGAGGG CGGCAGCCCG CGGCGTTCGG CTCTACTGGC TGGGGCAGGC GGGATTCGTC
ATCCTGACGA GCCGCTTCCG CATCGCTATC GACCCCTATC TCTCCGACAG TCTGGCGGAA
AAATACAAAG GCAAGCGCTT CGAGCACGAC CGCATGATGC CGGCACCGAT CGCACCATCC
GAGCTCGGCC CGGTCGACCT CGTTCTCGTG ACCCATCAGC ACACCGACCA TATGGATCCG
CAAACCCTCG TGCCGATCGC CGAAGCCAAT CCGGATTGCC GCTTCCTCCT GCCCCGCGCC
GCGCTGGGAG CTGCGCAGGA ACGCATCGGC GTTCAGTCGG AGCGGCTGGT TCCCATCGAT
GCGGGTGAGA GCGTCGAGCC TCTGCCCGGC TTCACCGTTA GCGCTATTCG TGCGGCCCAT
GAAACGCTCG AACGCACTCC CGAGGGCTGG CACCGGTTCC TGGGTTACGT GGTCGCAACC
GATGGGGTGC GACTATACCA TTCCGGCGAC ACGATCCCCC ACGAAGGGCT TGTGGAGGAA
GTGGCTCCCT TTCGGGTCGA CCTCGCGCTG CTGCCGGTCA ACGGCCGCCG CGCCGAGCTG
ACGGAGGCCG GCATTGCCGG CAATCTGACG CTGGATGAAG CATGCCTGCT GGCCGATCGG
ATCGGCGCAC CCGACATGAT CGCCCATCAT TACGGCATGT TTGCCTTCAA CACCGAATGC
CCTGAAGCGA TCGACACCAA ATCGGAATCC GCCGATTGCA GGGTGAGGCT CCATCGGGCA
AAGCTGTCGG TCGAATACCG ACTGTCTCGA GCAGGATGA
 
Protein sequence
MTPPSSMPFL ESPFSEPLAE RLRAAARGVR LYWLGQAGFV ILTSRFRIAI DPYLSDSLAE 
KYKGKRFEHD RMMPAPIAPS ELGPVDLVLV THQHTDHMDP QTLVPIAEAN PDCRFLLPRA
ALGAAQERIG VQSERLVPID AGESVEPLPG FTVSAIRAAH ETLERTPEGW HRFLGYVVAT
DGVRLYHSGD TIPHEGLVEE VAPFRVDLAL LPVNGRRAEL TEAGIAGNLT LDEACLLADR
IGAPDMIAHH YGMFAFNTEC PEAIDTKSES ADCRVRLHRA KLSVEYRLSR AG