Gene Smed_2449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2449 
Symbol 
ID5323310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2531471 
End bp2531998 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content62% 
IMG OID640791387 
Productcupin 2 domain-containing protein 
Protein accessionYP_001328116 
Protein GI150397649 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.66564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCCCA TGAAGACCGA TCCCAATCCG CGCATGCCCT ACCAGTATCC GATGCCGACG 
GAGGCGTTGC CCGACATCGT CATTCCGGAC GCCATCCCCG CCGACGACAG GGTCTGGGTG
CCGCAGGGGC AGAATGTCTG GTTTCGTCCA CTCTGTCTCA ACCGGTCCGC AGGCTACTGG
ATGAACCTCC TGAAAGTGCG CAAGTCCGGC GTGCTCAGTC GTCACCGCCA TCCCCAGGCC
GTGCATGGCT TCGTGCTGAA GGGCCGCTGG CACTATCTGG AGCACGACTG GGTGGCGGAG
GAGGGCGGTT ATGTCTTCGA GCCGCCGGGC GAGACCCACA CGCTCGTCGT GCCCGACGAC
GTGGAGGAGA TGATCACCTT CTTTCAGGTG AACGGCATCA TGTATTATGT CGACGCCTTC
GGCGAGCCGC TCGGCTTCGA GGACGTCTTC ACCAAGATCG ATATGTGTCG CGCGCATTAC
GAAGCGGTCG GACTGGGGGC GGATTATGTC GACCAGTTCA TCCGCTGA
 
Protein sequence
MPPMKTDPNP RMPYQYPMPT EALPDIVIPD AIPADDRVWV PQGQNVWFRP LCLNRSAGYW 
MNLLKVRKSG VLSRHRHPQA VHGFVLKGRW HYLEHDWVAE EGGYVFEPPG ETHTLVVPDD
VEEMITFFQV NGIMYYVDAF GEPLGFEDVF TKIDMCRAHY EAVGLGADYV DQFIR