Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2449 |
Symbol | |
ID | 5323310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2531471 |
End bp | 2531998 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640791387 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_001328116 |
Protein GI | 150397649 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.66564 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCCCA TGAAGACCGA TCCCAATCCG CGCATGCCCT ACCAGTATCC GATGCCGACG GAGGCGTTGC CCGACATCGT CATTCCGGAC GCCATCCCCG CCGACGACAG GGTCTGGGTG CCGCAGGGGC AGAATGTCTG GTTTCGTCCA CTCTGTCTCA ACCGGTCCGC AGGCTACTGG ATGAACCTCC TGAAAGTGCG CAAGTCCGGC GTGCTCAGTC GTCACCGCCA TCCCCAGGCC GTGCATGGCT TCGTGCTGAA GGGCCGCTGG CACTATCTGG AGCACGACTG GGTGGCGGAG GAGGGCGGTT ATGTCTTCGA GCCGCCGGGC GAGACCCACA CGCTCGTCGT GCCCGACGAC GTGGAGGAGA TGATCACCTT CTTTCAGGTG AACGGCATCA TGTATTATGT CGACGCCTTC GGCGAGCCGC TCGGCTTCGA GGACGTCTTC ACCAAGATCG ATATGTGTCG CGCGCATTAC GAAGCGGTCG GACTGGGGGC GGATTATGTC GACCAGTTCA TCCGCTGA
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Protein sequence | MPPMKTDPNP RMPYQYPMPT EALPDIVIPD AIPADDRVWV PQGQNVWFRP LCLNRSAGYW MNLLKVRKSG VLSRHRHPQA VHGFVLKGRW HYLEHDWVAE EGGYVFEPPG ETHTLVVPDD VEEMITFFQV NGIMYYVDAF GEPLGFEDVF TKIDMCRAHY EAVGLGADYV DQFIR
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