Gene Smed_2446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2446 
Symbol 
ID5323307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2528233 
End bp2529669 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content64% 
IMG OID640791384 
Productaldehyde dehydrogenase 
Protein accessionYP_001328113 
Protein GI150397646 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACGA ACACGCATTA TATTGACGGC CGGTTTGTCG AGGATCGCAT CTCAGGCCGC 
ATCGCGGTCT ACAATCCCGC AAGCGAGGAG CAGATCGCCG AGATCCCGGA TGGTCCTGCC
GAGGTCGTCG ACGCGGCCGT CGATGCGGCA CGCAAGGCGC AACCCGCCTG GTCGGAGTTG
CCGCCCATCG AACGCGCCGG CTATGTCAAG GCGATTGCCG AGAAGATTCG CGCGAAGGTC
GACATTCTGG CCGAAACGAT CTCCCGCGAG CAGGGCAAGG TCGTGTCGCT TGCGCGCGGC
GAAGTGCTCG GCATGGCCGG GCTTATGGAC TACATGGCCG AGTGGGCGCG CCGCATCGAG
GGCGAGATCA TCGCCAGCGA CCGGAAAGGC GAGACGATCT ATCTGAACCG GGTGCCGATC
GGCGTGGTTG CCGGCATACT GCCCTGGAAC TTTCCGTTCT ACCTGATCGG ACGCAAACTC
GCCCCGGCGC TCGTCGCCGG CAACACGATC GTCATCAAAC CGAGCGAGGA AACGCCGCTC
AATGCATTTC TCTTCGCCGA ACTGGCGGAC GAGGTCGGGC TGCCGAAGGG CGTGTTCAAC
ATGGTTTCAG GACGTGGCCG CACGACGGGC GCCGCCCTGT CGGGCCATCC CGGCATCGAT
CTCGTAAGCT TCACTGGCAG CGTGCCGACC GGTGTCGCCA TCATGGAGGC AGCGGCGAAG
AACCTCACGC GGGTCAATCT CGAACTCGGC GGCAAGGCGC CCGCAATCGT CCTCAAGGAT
GCCGACCTCG ACCTGGCGGT CGAAGCCATC ACGGCCTCGC GCGTCATCAA CACCGGCCAG
GTCTGCAACT GCGCGGAACG CATTTTCGTC GAACGCCAGG TGGCCGACGA ATTCACCGAC
CGCTTCGTCA AGCGGATGGC CGCCGTCACC TACGGAGACC CGATCGCCGA GCCGACCGTC
GACATGGGGC CGCTCGTCAA TGCGCTCCAA TTGGACAAGG TCGAGGCCAT GGTCGAACGG
GCAAGGGAGG CTGGGGCATC GGTGGCGCTG GGCGGAAAGC GCGCCGAGCG CAATTGCGGC
CACCATTATG AACCGACCGT GCTCACGGGC TGCACGCCCG ACATGGAGAT CATGCGCAAG
GAGATATTCG GACCCGTCGC GCCGATCGCC GTGGTCGAAG ACGCCGACGA GGCTGTTCAC
TACGCCAACG ACACCGAATA CGGCCTGACG TCGTCGCTCT ACACGCAGGA CCTCAACAAG
GCCATGCGCG TGACGCGGCG CCTGCAGTTC GGCGAGACCT ACATCAACCG CGAAAACGGC
GAGGCGTATC AAGGCTTTCA TGCCGGTCGC AAGAAATCCG GCATCGGCGG TGCAGATGGC
AAGCACGGCT TTTACGAATA CATGGAAACC CAGGCGGTCT ATATCCAGCA CGGTTGA
 
Protein sequence
MSTNTHYIDG RFVEDRISGR IAVYNPASEE QIAEIPDGPA EVVDAAVDAA RKAQPAWSEL 
PPIERAGYVK AIAEKIRAKV DILAETISRE QGKVVSLARG EVLGMAGLMD YMAEWARRIE
GEIIASDRKG ETIYLNRVPI GVVAGILPWN FPFYLIGRKL APALVAGNTI VIKPSEETPL
NAFLFAELAD EVGLPKGVFN MVSGRGRTTG AALSGHPGID LVSFTGSVPT GVAIMEAAAK
NLTRVNLELG GKAPAIVLKD ADLDLAVEAI TASRVINTGQ VCNCAERIFV ERQVADEFTD
RFVKRMAAVT YGDPIAEPTV DMGPLVNALQ LDKVEAMVER AREAGASVAL GGKRAERNCG
HHYEPTVLTG CTPDMEIMRK EIFGPVAPIA VVEDADEAVH YANDTEYGLT SSLYTQDLNK
AMRVTRRLQF GETYINRENG EAYQGFHAGR KKSGIGGADG KHGFYEYMET QAVYIQHG