| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2409 |
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| Symbol | |
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| ID | 5323270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2484504 |
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| End bp | 2485583 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640791347 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001328076 |
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| Protein GI | 150397609 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0527078 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATCA ATTCCATCAA GCGGCGCACG CTGCTCGGTG CGGGGCTTGC CGGCGCCTCG
GTGCTGGCGA TGCCCTCGGT GCTGCGGGCG CAAGACAGGT CGCTGAAAGT CGGCGTCTAT
GGCGGCTACT TCAAGGACTC GTTCGACAAA AACATCTTCC CCGAATTCAC CAAGGCATCG
GGCATCGCGA TCGAATCCGT CGCCGAGCCT ACCGGCGAGG CGTGGCTCGT CCAGCTCGAA
CAGGCCGCCC GTGCCGGACA GGCGCCCGCG GACGTTTCCA TGATGTCGCA GGTGGCGATG
CTGAAAGGGC AGGCGACTGA TCTCTGGACC CCGATCGACA TGGCGAAGAT CAAGAACGGC
TCGAACCTGA TCGAGCGATT CGTCAACAAG TATCCGGACG GCCGCATCGC CGGTATCGGA
GCCGTCTCCT GGTACATCAC GCTCGTGACC AACACCGACA GCTACAAGGA GGCGCCGACC
TCATGGGAGG CGTTCTGGGA TCCGGCGAAT GCCGACAAGC TCGGTCTCCT GGCGCTGGTT
TCCAATTCCT TCCTGCTCGA AGTAACCGCC AAGACCTTCA TGGGCGGCAC CAATGCGTTG
GACACGGAAG AAGGGATTCT CAAGGCATTC GAGAAGCTGG CCGAGGTGAA GCCGAACGTC
CGCCTCTGGT ACCGCGACGA AGCGCAGTTC GAGCAGGCGC TGAAATCGGG CGAAATCCCG
ATGGGACAAT ATTATCATGA CGTCACGGGC CTCGCGGCGG CCGACGGTCA CCCGGTCCGT
TCCACCTTCC CGAAGGAGGG CGGCATCCAG GATTCCGGCT GCTGGGCCGT GTCGCGTGCC
TCTCAGAAGG TCGAAGAAGC GCATATCTTC ATCGATTACA TGTGCCAGCC CGCGGTTCAG
GCAACGCTCT CGCGCAAGGT TGGCACCTCG CCGACGGTCA AGCGCGAGTC CACCGATCTG
ACGGACAAGG AGTTTGCCGG CGTTTCCTCG GACATCGAGC CGATCGTTCC GCGCTACGAC
CTCTACCAGA CGAAGTCGGA TTGGCTGAAC CAGAAATGGA CGGAGCTGAT CGTCGGCTGA
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| Protein sequence | MIINSIKRRT LLGAGLAGAS VLAMPSVLRA QDRSLKVGVY GGYFKDSFDK NIFPEFTKAS
GIAIESVAEP TGEAWLVQLE QAARAGQAPA DVSMMSQVAM LKGQATDLWT PIDMAKIKNG
SNLIERFVNK YPDGRIAGIG AVSWYITLVT NTDSYKEAPT SWEAFWDPAN ADKLGLLALV
SNSFLLEVTA KTFMGGTNAL DTEEGILKAF EKLAEVKPNV RLWYRDEAQF EQALKSGEIP
MGQYYHDVTG LAAADGHPVR STFPKEGGIQ DSGCWAVSRA SQKVEEAHIF IDYMCQPAVQ
ATLSRKVGTS PTVKRESTDL TDKEFAGVSS DIEPIVPRYD LYQTKSDWLN QKWTELIVG
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