Gene Smed_2399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2399 
Symbol 
ID5323260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2474983 
End bp2475369 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content58% 
IMG OID640791337 
Productresponse regulator receiver protein 
Protein accessionYP_001328066 
Protein GI150397599 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0186457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGTCA GTGACGTGCC GCCGGCGATC GAGTCAGTCC TCGTCCTCGA GGATAATTTC 
CTGATCGCCC TGGACATGGA GGAGATGCTC GTCTCGCTTG GCGTGACAAG CGTCCATGTT
GCCACCACCA AGGCGAAGGC GATGGAGCTT ATCGTCGAAC AGAGGCTCGA TTTTGCCATT
CTCGACATCA ATCTCGGGGA CGATACCAGC TTCGCCGTTG CCGATGCGCT GATGACACGC
GGCGTCAGGT TTGGCTTTAC CAGTGGCTAT GGAGAACTCC TGGCTCTTCC GAGCCATCTT
CGCGACGTCC CGAGGATCGA CAAGCCATTC AGCGAGGGAA CGCTGAGCAG TCTCATTGCC
ACTGCTGCCA ATCCACGGGA CGTGTGA
 
Protein sequence
MPVSDVPPAI ESVLVLEDNF LIALDMEEML VSLGVTSVHV ATTKAKAMEL IVEQRLDFAI 
LDINLGDDTS FAVADALMTR GVRFGFTSGY GELLALPSHL RDVPRIDKPF SEGTLSSLIA
TAANPRDV