Gene Smed_2316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2316 
Symbol 
ID5323177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2395596 
End bp2396600 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content62% 
IMG OID640791254 
Productalanine racemase 
Protein accessionYP_001327983 
Protein GI150397516 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.356237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.365484 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAA TCGCAAAAGT GGCAGCAAGG GCTGGCGTGT CGCCGACGAC GGTTTCTCAC 
GTGATCAATC ATAGCGATCG CGTGTCGAAA CCCCTGCGCG AGCGCGTCGA GGCGGCGATC
AAGGATCTCG GTTACAAACC CAATCCGCAG GCGCAGAGCC TGCGGACGGG GCGCACCAAT
ATCGTCGCAA TGCTGATCCC CGACATCCGC AACCCGTTTT ATCCGGAGCT CGTCAAGGCA
GCGCAGTCGG AGCTTGAAGT TGCCGGTCTG GACATGCTGA TCTTCAACAC CGACGTTCCG
GGCGGTCAGT CCCAGGATCA TGGGCGCGAA TACCTGCGCC AGATCGGCAA CAAGCGCGTC
GATGGTCTCA TCGTCGGCGA CTTTGCCCTG CACGGCATGC ATGACGCGCT GATGCGCGTC
GAGACGCCGA CCGTCTTCAT TGGCAACCTG CCGAATCACG CCGTGGATTG CGTCCGGATC
GACGATTTCG GCGGCGGCTA CCAGATGGGT GCTTACCTGG CCGGGAAGGG CCATCGGCGC
ATTGCCCATG TAACCGGTCC GTCATTCTTC GCCGAAGCGA TGTCGCGGGC GGATGGCTTC
GAACAGGGAT TGGCCGACCA TGGTGCAACG CCCGATCCCG GTTTGCGCTT CGAGGGCAGC
TATCTTGCGC CTTCCGGCAA GGCAGCCGCC GAATGGCTGC TTGCCGGACA CGGCGGTGAT
CTGCCGTCGG CAGTCTTCTT CGGCAACTAT CTGATGGCAG CTGGCGCTTT GGCCGAGTTC
TACGACCGCG GCATTCGCAT ACCCGACGAT TTCAAGGTCG CAGTATTCGG CGATCAGCCG
CAGCTCGAAT ATGTCCGGCC GCGGCTGACC CGCGTCGGCA ACGCGCCGGC CGAACTGGCG
CGCCGCGCAA CTCGCATGCT GCTCGAACGG ATCAACGGAA CCTATGAGGG AGAGCCGAGA
AGCGAGGTCG TTTCATGCGT GCTGCGGGAG TTCGAGACAG CGTGA
 
Protein sequence
MSTIAKVAAR AGVSPTTVSH VINHSDRVSK PLRERVEAAI KDLGYKPNPQ AQSLRTGRTN 
IVAMLIPDIR NPFYPELVKA AQSELEVAGL DMLIFNTDVP GGQSQDHGRE YLRQIGNKRV
DGLIVGDFAL HGMHDALMRV ETPTVFIGNL PNHAVDCVRI DDFGGGYQMG AYLAGKGHRR
IAHVTGPSFF AEAMSRADGF EQGLADHGAT PDPGLRFEGS YLAPSGKAAA EWLLAGHGGD
LPSAVFFGNY LMAAGALAEF YDRGIRIPDD FKVAVFGDQP QLEYVRPRLT RVGNAPAELA
RRATRMLLER INGTYEGEPR SEVVSCVLRE FETA