Gene Smed_2299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2299 
Symbol 
ID5323160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2377283 
End bp2378503 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content62% 
IMG OID640791237 
Producthypothetical protein 
Protein accessionYP_001327966 
Protein GI150397499 
COG category[S] Function unknown 
COG ID[COG5345] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0499582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.188357 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGATC CGATCGTTGC GTTCTTTCAG CGTGTATTCA CGGCAATAGG CCGTGGCATC 
GGATTGGCGG TGGCGTGGCT TCTCTGGCCC TTCGTCGCTC TCGGCAGCTG GTATCGCGCG
CGAAGCTGGG TGATCAAGGG GCCGATCGGT CTCATCCTCC TCTGCCTCGT GCTCTTTTAC
GGCTACTTTG TCTGGCAGAC GCAAGCCTGG ACTAATTTCA ATCCGGACTA TGTCGATCGC
TACAAGCTCG TCGAACGCAG GACGCCGGCC GGCTCGCCCA TCAGCGGTCC AGGGGCGACG
ACCGGGCAGT CCGGCTCCGC GGTCGACGCA AACCACGCCG CGGTCGCTCC CTCCGGCGCG
GACAGCACGA CCGAGGCCCT TGCGGTGGCG GAGCTTCCGG CCGGGACTGT CTGCCAGACA
TCGGCCGTCG TCGACGTAGC GGCGGACCTC ATCGAGTTCA ACGTCGATCA GAATGCGTGG
ATATCGTCGA TGCTGGGCTA CAAGCTCGGC TTTTTCGGGG TCGACTGGGA CGATACGCCC
TGGCTGGACA ATAAGGCATC CTTTCAGCGC GGCATAAACC AGGCCGTTCG CCGCACGGCG
GTGGAACTGG TGGATTCGCT CGGGCGCGTG CGTGGCACGT CCGGCGTCAA CAGAGAGCTG
CAAAGCGCGC GCGGTAACAT CCAGTTCGAC GAGGAGACCT GGTATTTCGG TCTCAACCCC
TTTGGTCCCA AGACTCCGAC GCCGAGCTTC TATCGGTCGG CGATGCGCGA TCTCAGGACG
TTCAATGTCT CGCTCAGCAA GTGCGAAGCG GTCTTCGACG GCCGGTCCGA CAACATGGTC
GAGTTCCTGG ACCGCGTTGC CAATGATCTC GGCAATACGT CCGCGATCAT CCGCGAGCGT
TCGGAGTTCC ACAATGGCGG CTGGTTCGAC ACGCGCGCGG ACGACCGCTT CTGGTTCGCC
TTCGGGCAGC TCTATGGCTA TTACGGCATC CTCTCGGCTG CCGGCGCCGA TTTCGAGAAT
GTCGTCACGC AGCGTGGGTT GGGGCCGATC TATACCGAAA CGATGAAGCA GCTGCGCGCG
GCGCTCAGGA TCCAGCCGCT CATCATCTCG AACGGCCGCG AGGACGGCTG GATCATGCCA
ACGCACCTCG CGACGATGGG TTTTTATATC CTGCGGGTCC GCTCCAACCT GGTGGAGATG
CGCGATATTC TTGCCCGTTG A
 
Protein sequence
MFDPIVAFFQ RVFTAIGRGI GLAVAWLLWP FVALGSWYRA RSWVIKGPIG LILLCLVLFY 
GYFVWQTQAW TNFNPDYVDR YKLVERRTPA GSPISGPGAT TGQSGSAVDA NHAAVAPSGA
DSTTEALAVA ELPAGTVCQT SAVVDVAADL IEFNVDQNAW ISSMLGYKLG FFGVDWDDTP
WLDNKASFQR GINQAVRRTA VELVDSLGRV RGTSGVNREL QSARGNIQFD EETWYFGLNP
FGPKTPTPSF YRSAMRDLRT FNVSLSKCEA VFDGRSDNMV EFLDRVANDL GNTSAIIRER
SEFHNGGWFD TRADDRFWFA FGQLYGYYGI LSAAGADFEN VVTQRGLGPI YTETMKQLRA
ALRIQPLIIS NGREDGWIMP THLATMGFYI LRVRSNLVEM RDILAR