Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2292 |
Symbol | |
ID | 5323153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2367285 |
End bp | 2368106 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640791230 |
Product | aminoglycoside phosphotransferase |
Protein accession | YP_001327959 |
Protein GI | 150397492 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG3231] Aminoglycoside phosphotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.168028 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.166014 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAAATC GCCAGTTTGC CGCCGAAAGG CTTCTGCCGT CGCCGCCCGC GGGTAGGGAA TGGCTGTCGG TTCGCCACGG CGAATCCGGC GACCGGGTTT ATGCGCGCAG CGACGGCGCC GCCTATGCAA AGATTGCGAG CGGCAAAGCC GCGGCACTGC TCGAAGGCGA GCGCGATCGC GCTGCGTGGC TGGCGGCGTT CGGCATCGGC TCACCGGCCG TTTACGACTG GATCGCCGAC AGCCACGAGG CGTGTCTCGT GCTCAGCGCG GTTCCGGGCG TGCCGGCGAG CGATCTGGCC GTCCCCGATC TCATGAAAGC ATGGCCCACG ATCATGCGGC AGTTTAAGGC CCTGCACGAG CTGCCCAGCG AATCATGCCC GTTCGAACGG CGCCTCGCTT CGATGTTCGA GCATGCCACG GACGTCGTTG CCCGCGAAGC GGTCAACCCG GATTTCCTTG CTCCCGAGGA TCAGAACGTA CCACCGAGCA AATTGCTTCT GGCTCTGGGG GTGGAGTTGC CGAAGCGCCT GGCCGAGGAG GCCCGCGATC TCGTGATCTG CCATGGCGAC GCATGCTTGC CGAATTTCAT GGTCGACCCG GAAACGCAGC GCTGCACAGG CCTCATCGAC CTCGGCCGGC TCGGAACGGC GGATCGATAT GTCGATTTTT CGCTTCTTCT CGGAAATGCC CGGGAAAGCT GGACGACGCC GGGCCAAGCG CAGATGGCAC GGGACTCGCT CTTCGGCATT CACGGGATCG CCAATCCGGA CGAAGGCCGG CTCGCCTTCT ATCTTCGTTT GGATCCGCTG ACCTGGGGAT GA
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Protein sequence | MINRQFAAER LLPSPPAGRE WLSVRHGESG DRVYARSDGA AYAKIASGKA AALLEGERDR AAWLAAFGIG SPAVYDWIAD SHEACLVLSA VPGVPASDLA VPDLMKAWPT IMRQFKALHE LPSESCPFER RLASMFEHAT DVVAREAVNP DFLAPEDQNV PPSKLLLALG VELPKRLAEE ARDLVICHGD ACLPNFMVDP ETQRCTGLID LGRLGTADRY VDFSLLLGNA RESWTTPGQA QMARDSLFGI HGIANPDEGR LAFYLRLDPL TWG
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