Gene Smed_2292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2292 
Symbol 
ID5323153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2367285 
End bp2368106 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content64% 
IMG OID640791230 
Productaminoglycoside phosphotransferase 
Protein accessionYP_001327959 
Protein GI150397492 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG3231] Aminoglycoside phosphotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.168028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.166014 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAATC GCCAGTTTGC CGCCGAAAGG CTTCTGCCGT CGCCGCCCGC GGGTAGGGAA 
TGGCTGTCGG TTCGCCACGG CGAATCCGGC GACCGGGTTT ATGCGCGCAG CGACGGCGCC
GCCTATGCAA AGATTGCGAG CGGCAAAGCC GCGGCACTGC TCGAAGGCGA GCGCGATCGC
GCTGCGTGGC TGGCGGCGTT CGGCATCGGC TCACCGGCCG TTTACGACTG GATCGCCGAC
AGCCACGAGG CGTGTCTCGT GCTCAGCGCG GTTCCGGGCG TGCCGGCGAG CGATCTGGCC
GTCCCCGATC TCATGAAAGC ATGGCCCACG ATCATGCGGC AGTTTAAGGC CCTGCACGAG
CTGCCCAGCG AATCATGCCC GTTCGAACGG CGCCTCGCTT CGATGTTCGA GCATGCCACG
GACGTCGTTG CCCGCGAAGC GGTCAACCCG GATTTCCTTG CTCCCGAGGA TCAGAACGTA
CCACCGAGCA AATTGCTTCT GGCTCTGGGG GTGGAGTTGC CGAAGCGCCT GGCCGAGGAG
GCCCGCGATC TCGTGATCTG CCATGGCGAC GCATGCTTGC CGAATTTCAT GGTCGACCCG
GAAACGCAGC GCTGCACAGG CCTCATCGAC CTCGGCCGGC TCGGAACGGC GGATCGATAT
GTCGATTTTT CGCTTCTTCT CGGAAATGCC CGGGAAAGCT GGACGACGCC GGGCCAAGCG
CAGATGGCAC GGGACTCGCT CTTCGGCATT CACGGGATCG CCAATCCGGA CGAAGGCCGG
CTCGCCTTCT ATCTTCGTTT GGATCCGCTG ACCTGGGGAT GA
 
Protein sequence
MINRQFAAER LLPSPPAGRE WLSVRHGESG DRVYARSDGA AYAKIASGKA AALLEGERDR 
AAWLAAFGIG SPAVYDWIAD SHEACLVLSA VPGVPASDLA VPDLMKAWPT IMRQFKALHE
LPSESCPFER RLASMFEHAT DVVAREAVNP DFLAPEDQNV PPSKLLLALG VELPKRLAEE
ARDLVICHGD ACLPNFMVDP ETQRCTGLID LGRLGTADRY VDFSLLLGNA RESWTTPGQA
QMARDSLFGI HGIANPDEGR LAFYLRLDPL TWG