Gene Smed_2282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2282 
Symbol 
ID5323143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2359658 
End bp2360149 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content66% 
IMG OID640791220 
ProductNUDIX hydrolase 
Protein accessionYP_001327949 
Protein GI150397482 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.725543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.213019 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAGA GCCGCTGGCC GGGGGATCCG TCATGGCGGG TTCGCTTTCT GACGCGGTTT 
GCGCATCTGT ATTTCGCCCT GGCGCGCGGC ATGACGCTCG GCGTGCGGGC CGCCTGTTTC
GACGATGCGG GGCGCGTGTT TCTCGTAAGG CATTCCTATC TGCCGGGCTG GCATCTTCCC
GGCGGCGGCC TCGATCGCAA TGAAACAGCG GTAGACGGCC TCGCCCGCGA GCTCAGGGAA
GAGGGAAACC TCGTGCTGAC GACAGCGCCG CAGCTCTTTC AGGTCTATTA CAACCGGCGC
ACCAGCAAAC GCGATCACGT GGTCTTTTTC CGCTGTGACA ATGTTCGCCA GGAGCAGCCG
AAGCGTGCCG ATCTCGAGAT CGCCGCCGCA GGCTTTTTCG CGCCGGACGA GCTTCCGTCG
GACACGACGC CCGCGACCCG GCGCCGACTC GCGGAACTGG CGGGAACGGC GGTGCCGGAC
GCGTTCTGGT AG
 
Protein sequence
MDESRWPGDP SWRVRFLTRF AHLYFALARG MTLGVRAACF DDAGRVFLVR HSYLPGWHLP 
GGGLDRNETA VDGLARELRE EGNLVLTTAP QLFQVYYNRR TSKRDHVVFF RCDNVRQEQP
KRADLEIAAA GFFAPDELPS DTTPATRRRL AELAGTAVPD AFW