Gene Smed_2255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2255 
Symbol 
ID5323116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2331880 
End bp2333031 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content62% 
IMG OID640791193 
Productpeptidase M24 
Protein accessionYP_001327922 
Protein GI150397455 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTTC ACTTCGCCGA AGAGGAATAT GCGGCCCGCC TGGCGAGGCT CACGGCCAAG 
ATGCAGGAAG AGAAACTCGA CGCCGTGCTG CTCTTCGCAC AGGAAAGCAT GTACTGGCTT
ACCGGCTATG ACACATTCGG CTATTGCTTC TTCCAGACGC TCGTCGTCAA GCGGGATGGT
TCGATGGTCC TGCTCACCCG ATCGGCCGAC CTGCGGCAGG CGCGCCACAC GTCGAATATC
GAGCGCATCG AGATCTGGGT TGACCGCGTC AATGCCGATC CGGCCATGGA TCTCAAGAAC
CTGCTCAGCG AGCTCGATCT CCTCGGCTGC CGCATCGGAG TCGAATACGA TACCCATGGC
ATGACCGGCA AAACCGCGCG CCTCGTGGAT CACCAGCTCT CAACTTTCGG GGAACTGGTC
GACGCATCGC TGCTTGTCAG CCGCCTGCGC CTGATCAAGA GTCCGGCGGA AATTGCCCAT
GTCGAGAAGG CGGCGAGCCT TGCCGACGAC GCGCTCGACG CTGCGCTGCC GCTGATCCGT
CCGGGCGGCA GCGAGGCGGA TATCCTGGCT GCGATGCAAG GCGCGGTTTT CGCCGGCGGC
GGCGACTATC CCGCCAATGA ATTCATCATA GGATCCGGGG CCGACGCATT GCTCTGCCGC
TACAAGGCAG GACGGAGAAA CCTCGATGCC AGCGACCAGC TCACCCTCGA ATGGGCGGGC
GTCAGCGCCC ACTATCACGC GGCAATGATG CGCACGATCG TTATCGGCGA ACCGACCAAC
CGGCATCGGG AGCTTTACAG CGCCTGCCGG GAAACGATCC AGGCGATCGA AATGGTGCTT
CGGCCCGGAA ACACCTTCGG CACCGTCTTC GACGTTCATG CCAAGATCAT GGACGAGCGC
GGGCTTGCCC GTCACCGCCT GAACGCCTGC GGCTATTCGC TCGGCGCACG CTTTTCGCCT
TCCTGGATGG AGCACCAGAT GTTCCATGTC GGCAACCCCC AGGAGATCGA ACCCGACATG
TCGCTCTTCG TCCACATGAT CATCATGGAT TCGGACAGCG GCACCGCGAT GACGCTTGGC
CAGACCTACC TCACCACAGC CGACACCCCG CGGCCTCTTT CGCGCTACGG ACTGGACTTC
ATATCTGCGT AA
 
Protein sequence
MALHFAEEEY AARLARLTAK MQEEKLDAVL LFAQESMYWL TGYDTFGYCF FQTLVVKRDG 
SMVLLTRSAD LRQARHTSNI ERIEIWVDRV NADPAMDLKN LLSELDLLGC RIGVEYDTHG
MTGKTARLVD HQLSTFGELV DASLLVSRLR LIKSPAEIAH VEKAASLADD ALDAALPLIR
PGGSEADILA AMQGAVFAGG GDYPANEFII GSGADALLCR YKAGRRNLDA SDQLTLEWAG
VSAHYHAAMM RTIVIGEPTN RHRELYSACR ETIQAIEMVL RPGNTFGTVF DVHAKIMDER
GLARHRLNAC GYSLGARFSP SWMEHQMFHV GNPQEIEPDM SLFVHMIIMD SDSGTAMTLG
QTYLTTADTP RPLSRYGLDF ISA