| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2248 |
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| Symbol | |
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| ID | 5323109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2325437 |
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| End bp | 2326399 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640791186 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001327915 |
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| Protein GI | 150397448 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.462301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGAC AGGAGGCGAT GGCGGTGTTT CTCGCCGTTG TCGAGGAGGG GGACTTCTCG
GCGGCTGCCC GGCGGCTGCG AATGACGCCA TCCGCCGTCA GCAAAATCGT TGGCCGGCTC
GAATCCCGGC TCGGAGTTCG GCTGTTGCAG CGCTCGACCC GCAGTATCAG CCTTACGGCC
GAGGGAAATT CCTATTCGGA GTCGGTCCGG CGCATTCTCG GCGATATGGA AGAGGCCGAG
CTGGCGATTC AGCCGGGCGC CGAGCCGCGC GGCCGATTAC GCGTCAGTCT TCCAAGTGCA
TTCGGCCATC GTCTGATCGT CCCGATGCTG CCGGCCTTCA TCGGACGCCA TCCGGCCATC
GAACTTGAAC TGGATTTCAC CGACGCGATC GTCGATCTCG TAAATGGCGA TGCGCACGTG
GCGGTGCGTG TGGCTGCCCA AGGCGACTCC ACGCTCGTCA CGCGGCGTCT GGCCCCCAAT
AGGCGCGTCA TCTGCGGTGC TCCTGATTAC TTCGAGCGTC ATGGTGTCCC CATGAGGCCC
GACGACCTCC TGAAGCACAT CTGCCTCGGC ATTTCGTCGC GTGGTGGGCT CAACCTGTGG
GAGTTCGATG AAGCTGGCGG CCGCCGGTCG ATGCGCATTC GAAGTTCGAT CGAGGCCAAC
AGCACGGAAG CACTGCGCCG GCTTGCGCTT GCCGGAATGG GGATTGTGCG GCTTTCGGAG
ATGCTGGTCG GGCAGGACAT CAGGGCTGGG CGCCTGAAGC CGGTGCTCAC GGACTGCAAT
CATGCCGAGG CCGAGCCGAT CAGCGTCGTC TATCCGCATC GCCGGTTCCT CTCGCCACGG
GTGCGCGTAT TCGTCGATTT CCTCGCTGAA CAATTTGCAA AATCGATCGC AGAAGGAGGC
GATGCTGCCC GTGTGATACG AGGTACATCC GGCGGTCTTC CCGAATCCGA CGCAATGCGT
TAA
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| Protein sequence | MDRQEAMAVF LAVVEEGDFS AAARRLRMTP SAVSKIVGRL ESRLGVRLLQ RSTRSISLTA
EGNSYSESVR RILGDMEEAE LAIQPGAEPR GRLRVSLPSA FGHRLIVPML PAFIGRHPAI
ELELDFTDAI VDLVNGDAHV AVRVAAQGDS TLVTRRLAPN RRVICGAPDY FERHGVPMRP
DDLLKHICLG ISSRGGLNLW EFDEAGGRRS MRIRSSIEAN STEALRRLAL AGMGIVRLSE
MLVGQDIRAG RLKPVLTDCN HAEAEPISVV YPHRRFLSPR VRVFVDFLAE QFAKSIAEGG
DAARVIRGTS GGLPESDAMR
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