Gene Smed_2228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2228 
Symbol 
ID5323089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2308865 
End bp2309314 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content60% 
IMG OID640791166 
ProductGatB/Yqey domain-containing protein 
Protein accessionYP_001327895 
Protein GI150397428 
COG category[S] Function unknown 
COG ID[COG1610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.134009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGAGC ATTTCGCCAA TGCACTGAAA GAAGCCCTCA AGGCCAAGGA TACCCGGCGC 
GTCTCGACCG TCCGCCTCAT CCAGGCCGCG ATCAAGGATC GCGACATCGC CAATCGTGGC
CATGGCAAGG ACCCGGTCGG CGACGATGAG ATCCTGCAGA TACTCGTCAA GATGATCAAG
CAGCGCGAAG AATCGGCCCG CGTTTACGAC GAGGGCGGCC GGCCGGAGCT TGCCCAGCAG
GAGCGGCAGG AAATCGCCAT CATCAACCAA TTCCTGCCCG AGCAGCTTTC CGAAGAAAAG
GTCAAGGAAG TCTGCGCCAA GACCGTTGCG GAGATCGGCG CGCACGGGCT GCGCGACATG
GGCAAATGTA TGAACGCTTT GAAGGAGCGC TATCCGGGCA AGATGGATTT CGGCAAGGCC
TCCGGCGTCG TTAAGGACCT CCTGAAGTAA
 
Protein sequence
MREHFANALK EALKAKDTRR VSTVRLIQAA IKDRDIANRG HGKDPVGDDE ILQILVKMIK 
QREESARVYD EGGRPELAQQ ERQEIAIINQ FLPEQLSEEK VKEVCAKTVA EIGAHGLRDM
GKCMNALKER YPGKMDFGKA SGVVKDLLK