Gene Smed_2214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2214 
Symbol 
ID5323074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2293869 
End bp2294660 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content62% 
IMG OID640791151 
Productaminoglycoside N(3')-acetyltransferase 
Protein accessionYP_001327881 
Protein GI150397414 
COG category[V] Defense mechanisms 
COG ID[COG2746] Aminoglycoside N3'-acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.22977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.57949 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAC GTGAATGGCG CATTTCGGAA CTCGTCAATC AACTCCTCAC CCTCGGGGTG 
AAGCCCGGAG GCGTTCTTGT CGTTCACTCT TCGTTTCGCA GCGTCCGGCC GGTCGAAGGC
GGTCCGGCCG GCATGATCGC CGCTCTGCGC ACCGCCATCG GCCCGGAAGG CACGCTCGTC
ATGCCCTCCT GGTCGGGCCT TGACGACGAG CCATTCGAGC CGGCGACGAC CTCAGCAACA
TCGGATCTGG GAATACTCGC CGATACTTTC TGGCGTCTTG AGGGTGTGGT GCGCAGCGAC
CATCCGTTCG CCTTTGCAGC GGCGGGACCG CTTGCCGCAC GCATCACATC GGACCCCCTG
CCCCTGCCCC CGCATTGTCC CCCCAGTCCG ATAGGGCGTA TCCATGAACT CGACGGACAG
GTGATACTCC TCGGCGTCGG ACACGATTCG AACACCACCT TGCATCTCGC CGAGCTGATG
TCCAAGGTTC CTTATGGAGT GCCGAGACAC TGCACGATCG TCGAAAATGG CAGCCGGGTC
CGCATTGCCT ATCTGGAGAA TGATCACTGT TGCCAGAACT TCAGCCTGGC CGACGTCTGG
TTGAGGCGAA ACGGCCTCCA GAAGGAGGGG CAGATCGGCA ACGCCCATGC CCGCCTGGTC
CGCTCACGCG ACATCGTGAA AATCGCAATG GAACAATTGG CCCACGACCC GCTCGTCTTC
CTGCATCCGG CAGAAGTGGC GTGCGAAGAA TGCGATGCAG CACGCCAGTC GATCGGCTAT
GGGCGTTCGT GA
 
Protein sequence
MTQREWRISE LVNQLLTLGV KPGGVLVVHS SFRSVRPVEG GPAGMIAALR TAIGPEGTLV 
MPSWSGLDDE PFEPATTSAT SDLGILADTF WRLEGVVRSD HPFAFAAAGP LAARITSDPL
PLPPHCPPSP IGRIHELDGQ VILLGVGHDS NTTLHLAELM SKVPYGVPRH CTIVENGSRV
RIAYLENDHC CQNFSLADVW LRRNGLQKEG QIGNAHARLV RSRDIVKIAM EQLAHDPLVF
LHPAEVACEE CDAARQSIGY GRS