| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2200 |
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| Symbol | |
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| ID | 5323060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2281006 |
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| End bp | 2282685 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640791138 |
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| Product | hypothetical protein |
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| Protein accession | YP_001327868 |
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| Protein GI | 150397401 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4425] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0720421 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACATG TTCAGCAGAC GGACCTGCCA AGACCGGTGC CCCGTCGCAT CTCCAACTTC
TTGCGTTCGT TTTCCACAAG CGGCCTCCTC ATAGGCGTTC TCTTCTTTGC CGTTTCGCTG
ACGCCAAGTC TCATACCGCG GCCCTACCTT ATTCAGGCGG TGATCTCGGG CTTCTCTCTC
GCGGCGGGCT ACGCGATCGG CGTGTTCCTG CGCTGGCTCT GGTCCTTCTT CGAGCTTCCC
GAACCGACGG TAAGGCGTGC ACGTACGCTG AAGATCGCCG CCGCCATCGT TTCGATTGCG
GCCGCCGTCG TATTCCTATG GCAGGCTTCG CATTGGCAAA ACACCGTGCG GCACATTATG
GGCCTGGAGC CGATCGAAAG CGCAGAGCCC GCCACTCTCG GCCTCATGGC CATTCTCGTA
TTCGCCGCCC TGGTCCTGCT GGCACGGCTA TTCCGGCTGA CCTTTCGCGT GCTTTCACGA
TGGCTGCAAT ATTTCCTCAC GCGGCCGGTT GCCAACGCGC TCGGCGGGCT CGTGGCGCTC
GCCTTGTTCT GGTCTGCGGC GAACGGTGTG ATCTTCAAGT TCGCGCTTCG CGCTGCGGAC
AGTTCCTTCC AGCAACTGGA TTCGCTCATC GATCCTGAGG TCGCACCGCC TGCGGATCCC
GGCAAGACAG GCAGCGCCGC ATCGCTTGTG CACTGGGACG AGCTTGGACG GCAAGGGCGG
CAGTTCATAG CCTCCGGGCC GACCGGCGCC GAAATCGGGG CGTTCTTCGG CATCGCGGCG
CCGGAACCCG TCCGGGTTTA TGTGGGACTG AACTCTGCCG AAACGGCGCG GGAAAGGGCG
AAGCTTGCGC TCGAGGAGTT GAAACGCGCC GGCGGCTTCG AACGCAAATC TCTGATCGTC
ATCGTGCCGA CCGGCACCGG CTGGATTGAT CCGGAGGCGC TCGACACCCT CGAATATCTG
CTTCACGGAG ATGTCGCGAG CGTGGCCGTA CAGTACTCCT ATCTCACCAG CTGGCTGTCG
CTTCTGGTCG AGCCGAGTTA CGGCGCCGAA GCGGCCGACG CCCTCTTCGA CGAGATCTAC
GGGCACTGGA CGACGCTGCC CAAGGATCGG CGGCCCAAGC TCTATCTCCA CGGTCTGAGC
CTCGGGGCGA TGAATTCGCA GGGGTCGGTC GATCTCTTCG ACGTCATCAG CGATCCCTTT
CAGGGCGCGC TCTGGAGCGG GCCGCCGTTC CAGAGCACCT TGTGGCGTTC GGTGACGGCG
GACCGGGTAC CGGACTCACC TGCCTGGCTG CCGCGCTACC GCGACAGCTC CGCCATCCGC
TTCACCAACC AGGAGAATGC CCTCGATATC CCCGGCGCGC ATTGGGGCGC GATGCGGATC
GTCTACCTGC AATATGCCAG CGACCCGGTG ACGTTCTTCG ATCCCCATTC CTTTTATCGC
GAGCCGGACT GGATGAGGTC GCCGCGAGGG CCGGACGTCT CACCGGCGCT GAGCTGGTTT
CCCTTGGTCA CCGGTCTGCA ACTGCTGGCC GACATGGCGT TGGCGACGAC CTCTCCGATG
GGCTACGGTC ACGTCTACGC CCCGGAACAC TACATTGACG CCTGGATGGC GGTCACCGAT
CCGCCGGGGA TTACGGCGGC GGATGTGGCG CGGCTGAAAG CGCAATTCTC CGCGCGTTGA
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| Protein sequence | MEHVQQTDLP RPVPRRISNF LRSFSTSGLL IGVLFFAVSL TPSLIPRPYL IQAVISGFSL
AAGYAIGVFL RWLWSFFELP EPTVRRARTL KIAAAIVSIA AAVVFLWQAS HWQNTVRHIM
GLEPIESAEP ATLGLMAILV FAALVLLARL FRLTFRVLSR WLQYFLTRPV ANALGGLVAL
ALFWSAANGV IFKFALRAAD SSFQQLDSLI DPEVAPPADP GKTGSAASLV HWDELGRQGR
QFIASGPTGA EIGAFFGIAA PEPVRVYVGL NSAETARERA KLALEELKRA GGFERKSLIV
IVPTGTGWID PEALDTLEYL LHGDVASVAV QYSYLTSWLS LLVEPSYGAE AADALFDEIY
GHWTTLPKDR RPKLYLHGLS LGAMNSQGSV DLFDVISDPF QGALWSGPPF QSTLWRSVTA
DRVPDSPAWL PRYRDSSAIR FTNQENALDI PGAHWGAMRI VYLQYASDPV TFFDPHSFYR
EPDWMRSPRG PDVSPALSWF PLVTGLQLLA DMALATTSPM GYGHVYAPEH YIDAWMAVTD
PPGITAADVA RLKAQFSAR
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