| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2187 |
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| Symbol | |
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| ID | 5323047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2262860 |
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| End bp | 2264020 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640791125 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001327855 |
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| Protein GI | 150397388 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.227535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.141729 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGA TCCTGAAATC CTGTACTGCG CTCACCCTGT CGATGGCGCT CGTCGCGCCT
GCCTTTGCGC AGGAGCCGCC GAAGGAACTG GGGCCAGGCG AAGGCGCGCT CTCGATCGTC
GCCTGGGCGG GCTATATCGA GCGCGGCGAG ACTGACAAGA ATTACGATTG GGTGACCGAT
TTCGAGAGCA AGACGGGATG CAAGGTCAGC GTCAAGACGG CGGCAACCTC GGATGAGATG
GTCGCTCTGA TGAACGAAGG CGGCTTCGAC CTCGTCACCG CTTCCGGCGA CGCCTCCCTC
CGCCTTGTAG CCGGCAAACG CGTCCAGCCG ATAAACACCG ATCTCATCCC CAGTTGGAAG
ACGATCGACG AGCGCATGCA GAACGCCCCA TGGCACACGG TCGACGGTGT CCACTACGGC
ACACCCTATG TCTGGGGGCC GAATGTTCTG ATGTACAATA CCGAAGCCTT CAAGGATCAG
CCGCCGAAGA GCTGGAATGT CGTTTTCGAA GAGACGACAT TGCCCGACGG CAAGTCGAAC
AAGGGCCGCA TTCAGGCTTA TGACGGCCCC ATCCATGTGG CCGACGCTGC CAACTACCTG
ATGGCGCACA AGCCAGACCT CGGCATCAAA GACCCCTACG AGCTGAATGA GGACCAGTAC
AAGGCAGCAC TCGACCTGTT GCGGACCCAA CGCACACTGG TCGGCCGCTA CTGGCACGAC
GCGATGATCC AGATCGACGA TTTCAAGAAT GAAGGCGTCG TGGCCTCCGG CTCCTGGCCC
TTTCAGGTCA ATCTGATGCA GGCCGAAAAG CAGCCTGTAG CCTCGATCAT TCCGGAAGAG
GGAGTGACGG GCTGGGCCGA TACGACGATG CTGCATTCCG ACAGCGAACA TCCGAACTGC
GCCTATATGT GGATGGAGCA TTCGCTTTCG CCGAAGGTCC AGGGTGACGT CTCGGCCTGG
TTCGGCGCCA ACCCCTCGGT CGGCGCCGCC TGCAAAGGCA ACGCCCTTCT GACCGACGAG
GGTTGCAAGA CCAATGGCTA TGACGACTTC GAAAAGGTCA AGTTCTGGAA GACGCCGGTA
ACGAAATGCG AGAGCCAGGG CGAATGCGTG CCCTATCACC GCTGGGTCTC CGACTATATC
GGCGTCATCG GCGGGCGGTA A
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| Protein sequence | MKQILKSCTA LTLSMALVAP AFAQEPPKEL GPGEGALSIV AWAGYIERGE TDKNYDWVTD
FESKTGCKVS VKTAATSDEM VALMNEGGFD LVTASGDASL RLVAGKRVQP INTDLIPSWK
TIDERMQNAP WHTVDGVHYG TPYVWGPNVL MYNTEAFKDQ PPKSWNVVFE ETTLPDGKSN
KGRIQAYDGP IHVADAANYL MAHKPDLGIK DPYELNEDQY KAALDLLRTQ RTLVGRYWHD
AMIQIDDFKN EGVVASGSWP FQVNLMQAEK QPVASIIPEE GVTGWADTTM LHSDSEHPNC
AYMWMEHSLS PKVQGDVSAW FGANPSVGAA CKGNALLTDE GCKTNGYDDF EKVKFWKTPV
TKCESQGECV PYHRWVSDYI GVIGGR
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