Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2182 |
Symbol | |
ID | 5323042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2256125 |
End bp | 2256919 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640791120 |
Product | putative transcriptional regulator |
Protein accession | YP_001327850 |
Protein GI | 150397383 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.293373 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.188357 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCGCAGG ACGATATATT CGCGACCAAT CTGCGTTTCG CCTGTGCGAC GCGGCGCTCG ATCTCGCAGG TCTGCCGCGA GATCGGCATA AATCGCCAGC AGTTCAATCG ATATATCAGC GGTGAAGCGC GGCCCTCGGC CCATAATGTT GCGCGGATCG CGGCCTTCTT CGGCCTTTCG GCCGATGATT TTTTGCTGCC GCCAAAACTC TTCGAGGCCC GCATGATCCG CCCGGAGCGA CACCGCCTGG AAGCGGGGCA GCTTCTCGAG GGGTTCCCGG GCGATGCCGC AGCCCTTCGC CGTCATTTCG GCTACTACCA GACCTATCAT CTTTCGCTCT CCTGGCCCGG TTTCGTCGTC TGTTCCTGCG CGCATATCTA TGAGGAAGGC GGCTCGATCC GGGTAAAATC GATCGAGCGC ATACGCGACA GGGCGAACGA GATCGAGCAG TTCTCAAAAT ATGTCGGACT TGTCACCTTC TGGCGAAACC GCATTTTCAT TGCCGAGCGC ACCGTGGGGC AGGCGGCGAT GCTGGCGCAG ACGATCCTGA TGCCGTTCGA GTTGCACCAG CGGGTCTATC TGCGCGGCAC GACGATGGGG GTTTCATGGC GCAAGGAGAA CCTGCCCTAC GCATCGCGGA TGATCTGGCG GCATATCGGT CAGGATCCGG ACAAGCGTCA GATGCTTTCG CGTTGCGGGC TGGTGCCGTT TGGCGCGCGG CATCTGCCGT CCGCGGTGAG ACGCTTTCTC GAGGTGCCCG AGGCCGAGGT GCTGACCATT CCGGCGGAGT ATTAG
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Protein sequence | MPQDDIFATN LRFACATRRS ISQVCREIGI NRQQFNRYIS GEARPSAHNV ARIAAFFGLS ADDFLLPPKL FEARMIRPER HRLEAGQLLE GFPGDAAALR RHFGYYQTYH LSLSWPGFVV CSCAHIYEEG GSIRVKSIER IRDRANEIEQ FSKYVGLVTF WRNRIFIAER TVGQAAMLAQ TILMPFELHQ RVYLRGTTMG VSWRKENLPY ASRMIWRHIG QDPDKRQMLS RCGLVPFGAR HLPSAVRRFL EVPEAEVLTI PAEY
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