Gene Smed_2182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2182 
Symbol 
ID5323042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2256125 
End bp2256919 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content61% 
IMG OID640791120 
Productputative transcriptional regulator 
Protein accessionYP_001327850 
Protein GI150397383 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.293373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.188357 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGCAGG ACGATATATT CGCGACCAAT CTGCGTTTCG CCTGTGCGAC GCGGCGCTCG 
ATCTCGCAGG TCTGCCGCGA GATCGGCATA AATCGCCAGC AGTTCAATCG ATATATCAGC
GGTGAAGCGC GGCCCTCGGC CCATAATGTT GCGCGGATCG CGGCCTTCTT CGGCCTTTCG
GCCGATGATT TTTTGCTGCC GCCAAAACTC TTCGAGGCCC GCATGATCCG CCCGGAGCGA
CACCGCCTGG AAGCGGGGCA GCTTCTCGAG GGGTTCCCGG GCGATGCCGC AGCCCTTCGC
CGTCATTTCG GCTACTACCA GACCTATCAT CTTTCGCTCT CCTGGCCCGG TTTCGTCGTC
TGTTCCTGCG CGCATATCTA TGAGGAAGGC GGCTCGATCC GGGTAAAATC GATCGAGCGC
ATACGCGACA GGGCGAACGA GATCGAGCAG TTCTCAAAAT ATGTCGGACT TGTCACCTTC
TGGCGAAACC GCATTTTCAT TGCCGAGCGC ACCGTGGGGC AGGCGGCGAT GCTGGCGCAG
ACGATCCTGA TGCCGTTCGA GTTGCACCAG CGGGTCTATC TGCGCGGCAC GACGATGGGG
GTTTCATGGC GCAAGGAGAA CCTGCCCTAC GCATCGCGGA TGATCTGGCG GCATATCGGT
CAGGATCCGG ACAAGCGTCA GATGCTTTCG CGTTGCGGGC TGGTGCCGTT TGGCGCGCGG
CATCTGCCGT CCGCGGTGAG ACGCTTTCTC GAGGTGCCCG AGGCCGAGGT GCTGACCATT
CCGGCGGAGT ATTAG
 
Protein sequence
MPQDDIFATN LRFACATRRS ISQVCREIGI NRQQFNRYIS GEARPSAHNV ARIAAFFGLS 
ADDFLLPPKL FEARMIRPER HRLEAGQLLE GFPGDAAALR RHFGYYQTYH LSLSWPGFVV
CSCAHIYEEG GSIRVKSIER IRDRANEIEQ FSKYVGLVTF WRNRIFIAER TVGQAAMLAQ
TILMPFELHQ RVYLRGTTMG VSWRKENLPY ASRMIWRHIG QDPDKRQMLS RCGLVPFGAR
HLPSAVRRFL EVPEAEVLTI PAEY