Gene Smed_2176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2176 
Symbol 
ID5323036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2247644 
End bp2249707 
Gene Length2064 bp 
Protein Length687 aa 
Translation table11 
GC content65% 
IMG OID640791114 
ProductCoA-binding domain-containing protein 
Protein accessionYP_001327844 
Protein GI150397377 
COG category[C] Energy production and conversion 
COG ID[COG1042] Acyl-CoA synthetase (NDP forming) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC CTTATCGCTC CCTCGACCGC CTCATCCGTC CCCGCTCGAT CGCCGTCTTC 
GGCGGCAAGG AGGCGCGGCG CGTCATCGAA CAATGCGACA AGATGGGCTT TTCAGGCGAA
ATCTGGCCCG TCCATCCGCG CGAAGAGGAA ATCCTCGGCC GCCGCTGCTA TCGTTTGGTA
GCCGACCTGC CGGAGGCGCC GGATGCCGCC TTCGTCGGCG TCAACCGGGC GCTGACGATC
GAGATCATCC GCGATCTCGC CGCGCGCGGC GCCGGCGGTG CCATCTGCTA CGCTTCGGGT
TTTCGCGAGG CGGCAAACGA GCTTGCCGAC GGCAACGACC TGCAGGAGGC GCTTGTCGCT
GCAGCCGGCG ACATGCCGAT CGTCGGGCCC AACTGCTACG GTTTCATCAA CATGCTGGAC
GGCGCACTGC TCTGGCCCGA CCAGCACGGA ATGCTCCGCG TCGAAAGCGG CGTCGCTATC
CTCACGCAAT CCTCCAACAT CGCCTGCAAC ATCTCCATGC AGAAGCGCGG ATTGCCGCTG
GCCTATGTCA TGACGGCCGG CAACCAGGCG CAAACCGGCC TTTCCGACAT TGCCTGCGCC
GTCCTCGAGG ACCCGCGTGT GACCGCCGTC GGACTGCACA TCGAGGGTTT CGACAGCATC
GAGGCCCTGG AGCGGCTGGC CACTCGGGCA CGCGAACTGC GCAAGCCAGT GGTCACGCTG
AAGGTCGGAA AATCGGAAGC GGCGCAGCTT GCCACCGTCT CCCACACCGC TTCCCTTGCC
GGCAACGACC GCGTTTCATC GGCCCTGCTC GCCCGCCTCG GTATTGGTCG GGTCGATACG
CTGCCGGAGC TTCTCGAAAC CCTTAAACTG CTGCATCTTC ACGGGCCCCT GGCCAGCGCC
GATATCTCCT CGATGAGCTG TTCGGGCGGC GAGGCATCGC TGATGGCGGA TGCGGGCGTG
CGGCGCAGCA TCAACTTCCG GCCGCTCAGG GAAGAGCAGC GCAATCCGCT TCGCGAAAGC
CTCGGCGAAA TGGTGACGAT CGCCAATCCG CTCGACTACC ACACCTTCGT CTGGGGAAAT
CGCGACAAGC AGACGGCCGC CTTCACCGCC ATGATGCAAG GCGGCTACGC GCTCAATCTG
ATTGTCCTCG ATTTCCCGCG GCTCGACCGC TGCGACGCCG CCGACTGGGT AACGACCTGC
GAGGCGGTCG TCGATTCCTC AAAGGCAACG GGTGCCCCCG CCGGCATCGT CGCCAGTCTC
GGCGAAAACA TGCCGGAGGA AACGGCGCTC ACCCTGATGG CGGCTGGCGT CGTACCATTC
TTCGGCATCG ACGAAGCGCT CGCTGCCGCC GAGAATGCCG CGGCGATCGG TGCGGCCTGG
GCACGTCCCG TGGCACCTCC CCTGCTTCGC TCGTTCCCCG AAGCCGGCGA CATCGTCACC
CTGAGCGAAG CCGAAGCAAA AGGCGAGCTC GCAGCAGCGG GCGTGACCGT TCCGCGCGGC
AGGAGCGTCG CTACCCCGGA GGAGGCAGCG ACCGCTGCCG CGGCACTCGG CTTCCCCGTC
GTCCTCAAGG GCCTTGGGGT GGCGCACAAG ACCGAAGCCG GCGCGGTCAA GCTCAATCTG
GCTAGCCATG ACGAGGTCAT TGCTGCGGCG CGGAGCATGA CAGCCGTCGC CTCCGGTTAT
CTCGTCGAGA AAATGGTCGC GAAGCCCGTG GCGGAGCTGA TCGTTGGGGC GATGCGTGAT
CCCGTCGCCG GGCCGGTGCT GACCATCGGC GCGGGCGGAA TTCTCGTCGA GCTGCTGGAG
GATTCGGCAA TCCTGACGCT GCCGGCCACG CAAGAGGCGA TCCGCGACGC GATTGCGGGC
CTCAAAATCA GCAAGGTGCT GAACGGCTAT CGCGGCAATC CGAAGGGCGA TATGGCGGCA
TTGGTGGCAA CTGTCGCTGC CGCGGCATCC TATGTCGTTG CAAACGCTTC CAAGCTCGAA
GAACTCGATA TCAATCCTGT TATGGTGTTG CCGGAGGGCC AGGGAGCCCT TGCAGCCGAC
GCCCTGATCC GCCGGAGGAA ATGA
 
Protein sequence
MTTPYRSLDR LIRPRSIAVF GGKEARRVIE QCDKMGFSGE IWPVHPREEE ILGRRCYRLV 
ADLPEAPDAA FVGVNRALTI EIIRDLAARG AGGAICYASG FREAANELAD GNDLQEALVA
AAGDMPIVGP NCYGFINMLD GALLWPDQHG MLRVESGVAI LTQSSNIACN ISMQKRGLPL
AYVMTAGNQA QTGLSDIACA VLEDPRVTAV GLHIEGFDSI EALERLATRA RELRKPVVTL
KVGKSEAAQL ATVSHTASLA GNDRVSSALL ARLGIGRVDT LPELLETLKL LHLHGPLASA
DISSMSCSGG EASLMADAGV RRSINFRPLR EEQRNPLRES LGEMVTIANP LDYHTFVWGN
RDKQTAAFTA MMQGGYALNL IVLDFPRLDR CDAADWVTTC EAVVDSSKAT GAPAGIVASL
GENMPEETAL TLMAAGVVPF FGIDEALAAA ENAAAIGAAW ARPVAPPLLR SFPEAGDIVT
LSEAEAKGEL AAAGVTVPRG RSVATPEEAA TAAAALGFPV VLKGLGVAHK TEAGAVKLNL
ASHDEVIAAA RSMTAVASGY LVEKMVAKPV AELIVGAMRD PVAGPVLTIG AGGILVELLE
DSAILTLPAT QEAIRDAIAG LKISKVLNGY RGNPKGDMAA LVATVAAAAS YVVANASKLE
ELDINPVMVL PEGQGALAAD ALIRRRK