Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2176 |
Symbol | |
ID | 5323036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2247644 |
End bp | 2249707 |
Gene Length | 2064 bp |
Protein Length | 687 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640791114 |
Product | CoA-binding domain-containing protein |
Protein accession | YP_001327844 |
Protein GI | 150397377 |
COG category | [C] Energy production and conversion |
COG ID | [COG1042] Acyl-CoA synthetase (NDP forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCC CTTATCGCTC CCTCGACCGC CTCATCCGTC CCCGCTCGAT CGCCGTCTTC GGCGGCAAGG AGGCGCGGCG CGTCATCGAA CAATGCGACA AGATGGGCTT TTCAGGCGAA ATCTGGCCCG TCCATCCGCG CGAAGAGGAA ATCCTCGGCC GCCGCTGCTA TCGTTTGGTA GCCGACCTGC CGGAGGCGCC GGATGCCGCC TTCGTCGGCG TCAACCGGGC GCTGACGATC GAGATCATCC GCGATCTCGC CGCGCGCGGC GCCGGCGGTG CCATCTGCTA CGCTTCGGGT TTTCGCGAGG CGGCAAACGA GCTTGCCGAC GGCAACGACC TGCAGGAGGC GCTTGTCGCT GCAGCCGGCG ACATGCCGAT CGTCGGGCCC AACTGCTACG GTTTCATCAA CATGCTGGAC GGCGCACTGC TCTGGCCCGA CCAGCACGGA ATGCTCCGCG TCGAAAGCGG CGTCGCTATC CTCACGCAAT CCTCCAACAT CGCCTGCAAC ATCTCCATGC AGAAGCGCGG ATTGCCGCTG GCCTATGTCA TGACGGCCGG CAACCAGGCG CAAACCGGCC TTTCCGACAT TGCCTGCGCC GTCCTCGAGG ACCCGCGTGT GACCGCCGTC GGACTGCACA TCGAGGGTTT CGACAGCATC GAGGCCCTGG AGCGGCTGGC CACTCGGGCA CGCGAACTGC GCAAGCCAGT GGTCACGCTG AAGGTCGGAA AATCGGAAGC GGCGCAGCTT GCCACCGTCT CCCACACCGC TTCCCTTGCC GGCAACGACC GCGTTTCATC GGCCCTGCTC GCCCGCCTCG GTATTGGTCG GGTCGATACG CTGCCGGAGC TTCTCGAAAC CCTTAAACTG CTGCATCTTC ACGGGCCCCT GGCCAGCGCC GATATCTCCT CGATGAGCTG TTCGGGCGGC GAGGCATCGC TGATGGCGGA TGCGGGCGTG CGGCGCAGCA TCAACTTCCG GCCGCTCAGG GAAGAGCAGC GCAATCCGCT TCGCGAAAGC CTCGGCGAAA TGGTGACGAT CGCCAATCCG CTCGACTACC ACACCTTCGT CTGGGGAAAT CGCGACAAGC AGACGGCCGC CTTCACCGCC ATGATGCAAG GCGGCTACGC GCTCAATCTG ATTGTCCTCG ATTTCCCGCG GCTCGACCGC TGCGACGCCG CCGACTGGGT AACGACCTGC GAGGCGGTCG TCGATTCCTC AAAGGCAACG GGTGCCCCCG CCGGCATCGT CGCCAGTCTC GGCGAAAACA TGCCGGAGGA AACGGCGCTC ACCCTGATGG CGGCTGGCGT CGTACCATTC TTCGGCATCG ACGAAGCGCT CGCTGCCGCC GAGAATGCCG CGGCGATCGG TGCGGCCTGG GCACGTCCCG TGGCACCTCC CCTGCTTCGC TCGTTCCCCG AAGCCGGCGA CATCGTCACC CTGAGCGAAG CCGAAGCAAA AGGCGAGCTC GCAGCAGCGG GCGTGACCGT TCCGCGCGGC AGGAGCGTCG CTACCCCGGA GGAGGCAGCG ACCGCTGCCG CGGCACTCGG CTTCCCCGTC GTCCTCAAGG GCCTTGGGGT GGCGCACAAG ACCGAAGCCG GCGCGGTCAA GCTCAATCTG GCTAGCCATG ACGAGGTCAT TGCTGCGGCG CGGAGCATGA CAGCCGTCGC CTCCGGTTAT CTCGTCGAGA AAATGGTCGC GAAGCCCGTG GCGGAGCTGA TCGTTGGGGC GATGCGTGAT CCCGTCGCCG GGCCGGTGCT GACCATCGGC GCGGGCGGAA TTCTCGTCGA GCTGCTGGAG GATTCGGCAA TCCTGACGCT GCCGGCCACG CAAGAGGCGA TCCGCGACGC GATTGCGGGC CTCAAAATCA GCAAGGTGCT GAACGGCTAT CGCGGCAATC CGAAGGGCGA TATGGCGGCA TTGGTGGCAA CTGTCGCTGC CGCGGCATCC TATGTCGTTG CAAACGCTTC CAAGCTCGAA GAACTCGATA TCAATCCTGT TATGGTGTTG CCGGAGGGCC AGGGAGCCCT TGCAGCCGAC GCCCTGATCC GCCGGAGGAA ATGA
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Protein sequence | MTTPYRSLDR LIRPRSIAVF GGKEARRVIE QCDKMGFSGE IWPVHPREEE ILGRRCYRLV ADLPEAPDAA FVGVNRALTI EIIRDLAARG AGGAICYASG FREAANELAD GNDLQEALVA AAGDMPIVGP NCYGFINMLD GALLWPDQHG MLRVESGVAI LTQSSNIACN ISMQKRGLPL AYVMTAGNQA QTGLSDIACA VLEDPRVTAV GLHIEGFDSI EALERLATRA RELRKPVVTL KVGKSEAAQL ATVSHTASLA GNDRVSSALL ARLGIGRVDT LPELLETLKL LHLHGPLASA DISSMSCSGG EASLMADAGV RRSINFRPLR EEQRNPLRES LGEMVTIANP LDYHTFVWGN RDKQTAAFTA MMQGGYALNL IVLDFPRLDR CDAADWVTTC EAVVDSSKAT GAPAGIVASL GENMPEETAL TLMAAGVVPF FGIDEALAAA ENAAAIGAAW ARPVAPPLLR SFPEAGDIVT LSEAEAKGEL AAAGVTVPRG RSVATPEEAA TAAAALGFPV VLKGLGVAHK TEAGAVKLNL ASHDEVIAAA RSMTAVASGY LVEKMVAKPV AELIVGAMRD PVAGPVLTIG AGGILVELLE DSAILTLPAT QEAIRDAIAG LKISKVLNGY RGNPKGDMAA LVATVAAAAS YVVANASKLE ELDINPVMVL PEGQGALAAD ALIRRRK
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