Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2159 |
Symbol | |
ID | 5323019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2228183 |
End bp | 2229760 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640791097 |
Product | carbohydrate kinase FGGY |
Protein accession | YP_001327827 |
Protein GI | 150397360 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.809655 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGACA TCCTCATCGG CATCGATGCC GGAACGTCGG TCATCAAATC GGTCGCCTTC GATCTCAGCG GCAGGCAGCT CGCGATGACG GCGGTTCCGA ACAGCTATGA GGCGGTGGGC CGCACCGGCA GCGTGCAGGA GTTACGGCGT ACCTGGACGG ACACCGTCAA AACCCTGGCC GAGCTCTCGG CCAGGATCGA GAACCTCCCT GGCCGCGTTG CCGCTATCGC GGTGACCGGT CAGGGGGACG GCACCTGGAT GATCGACGGC GATGGAGAGC CGGTCGGCAA AGGCTGGCTC TGGCTCGATG CGCGCGCAAG CGCCGTCGTC GAGCGGCTGC GGGCTGAAAG CGGTGACGCG GAACGTTTCG CGCGCACCGG CTCCGGTCTT GCCGCCTGCC AGCAGGGCCC GCAGCTTCGC TGGATGAAGG ATCACGCACC GGAGATGCTG GAAGGGGCGG CGACCGCATT TCATTGCAAG GACTGGCTCT ATTTCAATCT CACCGACAAG CGCGCGACCG ATCCCTCGGA GGCGAATTTC ACCTTCGGCG ATTTCCGCAC ACGGCAATAT TGCGATGATG TGATCGACTT TCTCGGTCTC AAGGACCTCA AGCACCTGCT GCCGGAGATC GTCGACGGTG CTACCACGCA TCACCCACTC TCGGCCGCCG CGGCGGCCGC TGCGGGCTTG CCGGCGGGAA CGCCGGTCGT GCTCGGCTAT GTCGACGTCG TCTGCACGGC ACTCGGCGCC GGGCTCTATG AACCCGGAAC CGACGCGGGC TGCTCGATCA TCGGCTCGAC GGGCATGCAT ATGCGGCTGG CGGCCGGTGC CGATGATGTC CGGCTAAACC AGAACCATAC CGGCTACACC ATGTGCATGC CGATCCCCAA CACCTACGCG CAGATGCAGT CGAATATGGC GGCGACGCTC AATATCGACT GGATTCTGCA ATTTGCGGGA GATCTCCTCA AAGGGATGGG GATCGAGAAG TCGAAGAGCG ATCTGCTCGC CCATGTGGAT CACTGGCTCG CCGAGGCGAA GGAGACTCCG CTTCTCTTCC ATCCCTATAT TTCGGAGGCC GGGGAGCGCG GTCCCTTCGT CGATGCCGCT GCCCGCGCGT CCTTCGTCGG CCTTTCGATC AATCACGGCT TCGGCGACAT GGTGCATGCC GTGTTCGACG GTCTCGCCTT TGCTGCGCGG GATTGTTACG CCGAAATGGG GCCGCTGCCG GCACGCGTGC GTTTGTCGGG CGGGGCGGCT CGCAGCGCCT CGTTGCGGCG CATTCTCGGT GGCGCTCTGG GCGCCAGCAT CCAGACGAGC GAACGCGAGG AGGCAGGTGC CGCCGGTGCG GCTATGATCG CAGCCGTTTC GCTGGGAATT CATCCCACCA TGGCCGATTG CGTTCGCGAA TGGGTTCGGC CGCATCACCG GCCGGCAGAG CCGGCGGATA AGGATCTCGC TCGTCGCTAC GACGCAATTT TCCCCGCCTA CAAGCAGTCG CGCCTCGCGC TCGAACCCGT CTGGCATGCG CTCTCCCACG CAACCGGAAC GGGAAACCAA CAGGAAAGAC CGCAATGA
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Protein sequence | MRDILIGIDA GTSVIKSVAF DLSGRQLAMT AVPNSYEAVG RTGSVQELRR TWTDTVKTLA ELSARIENLP GRVAAIAVTG QGDGTWMIDG DGEPVGKGWL WLDARASAVV ERLRAESGDA ERFARTGSGL AACQQGPQLR WMKDHAPEML EGAATAFHCK DWLYFNLTDK RATDPSEANF TFGDFRTRQY CDDVIDFLGL KDLKHLLPEI VDGATTHHPL SAAAAAAAGL PAGTPVVLGY VDVVCTALGA GLYEPGTDAG CSIIGSTGMH MRLAAGADDV RLNQNHTGYT MCMPIPNTYA QMQSNMAATL NIDWILQFAG DLLKGMGIEK SKSDLLAHVD HWLAEAKETP LLFHPYISEA GERGPFVDAA ARASFVGLSI NHGFGDMVHA VFDGLAFAAR DCYAEMGPLP ARVRLSGGAA RSASLRRILG GALGASIQTS EREEAGAAGA AMIAAVSLGI HPTMADCVRE WVRPHHRPAE PADKDLARRY DAIFPAYKQS RLALEPVWHA LSHATGTGNQ QERPQ
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