Gene Smed_2159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2159 
Symbol 
ID5323019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2228183 
End bp2229760 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content64% 
IMG OID640791097 
Productcarbohydrate kinase FGGY 
Protein accessionYP_001327827 
Protein GI150397360 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1070] Sugar (pentulose and hexulose) kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.809655 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGACA TCCTCATCGG CATCGATGCC GGAACGTCGG TCATCAAATC GGTCGCCTTC 
GATCTCAGCG GCAGGCAGCT CGCGATGACG GCGGTTCCGA ACAGCTATGA GGCGGTGGGC
CGCACCGGCA GCGTGCAGGA GTTACGGCGT ACCTGGACGG ACACCGTCAA AACCCTGGCC
GAGCTCTCGG CCAGGATCGA GAACCTCCCT GGCCGCGTTG CCGCTATCGC GGTGACCGGT
CAGGGGGACG GCACCTGGAT GATCGACGGC GATGGAGAGC CGGTCGGCAA AGGCTGGCTC
TGGCTCGATG CGCGCGCAAG CGCCGTCGTC GAGCGGCTGC GGGCTGAAAG CGGTGACGCG
GAACGTTTCG CGCGCACCGG CTCCGGTCTT GCCGCCTGCC AGCAGGGCCC GCAGCTTCGC
TGGATGAAGG ATCACGCACC GGAGATGCTG GAAGGGGCGG CGACCGCATT TCATTGCAAG
GACTGGCTCT ATTTCAATCT CACCGACAAG CGCGCGACCG ATCCCTCGGA GGCGAATTTC
ACCTTCGGCG ATTTCCGCAC ACGGCAATAT TGCGATGATG TGATCGACTT TCTCGGTCTC
AAGGACCTCA AGCACCTGCT GCCGGAGATC GTCGACGGTG CTACCACGCA TCACCCACTC
TCGGCCGCCG CGGCGGCCGC TGCGGGCTTG CCGGCGGGAA CGCCGGTCGT GCTCGGCTAT
GTCGACGTCG TCTGCACGGC ACTCGGCGCC GGGCTCTATG AACCCGGAAC CGACGCGGGC
TGCTCGATCA TCGGCTCGAC GGGCATGCAT ATGCGGCTGG CGGCCGGTGC CGATGATGTC
CGGCTAAACC AGAACCATAC CGGCTACACC ATGTGCATGC CGATCCCCAA CACCTACGCG
CAGATGCAGT CGAATATGGC GGCGACGCTC AATATCGACT GGATTCTGCA ATTTGCGGGA
GATCTCCTCA AAGGGATGGG GATCGAGAAG TCGAAGAGCG ATCTGCTCGC CCATGTGGAT
CACTGGCTCG CCGAGGCGAA GGAGACTCCG CTTCTCTTCC ATCCCTATAT TTCGGAGGCC
GGGGAGCGCG GTCCCTTCGT CGATGCCGCT GCCCGCGCGT CCTTCGTCGG CCTTTCGATC
AATCACGGCT TCGGCGACAT GGTGCATGCC GTGTTCGACG GTCTCGCCTT TGCTGCGCGG
GATTGTTACG CCGAAATGGG GCCGCTGCCG GCACGCGTGC GTTTGTCGGG CGGGGCGGCT
CGCAGCGCCT CGTTGCGGCG CATTCTCGGT GGCGCTCTGG GCGCCAGCAT CCAGACGAGC
GAACGCGAGG AGGCAGGTGC CGCCGGTGCG GCTATGATCG CAGCCGTTTC GCTGGGAATT
CATCCCACCA TGGCCGATTG CGTTCGCGAA TGGGTTCGGC CGCATCACCG GCCGGCAGAG
CCGGCGGATA AGGATCTCGC TCGTCGCTAC GACGCAATTT TCCCCGCCTA CAAGCAGTCG
CGCCTCGCGC TCGAACCCGT CTGGCATGCG CTCTCCCACG CAACCGGAAC GGGAAACCAA
CAGGAAAGAC CGCAATGA
 
Protein sequence
MRDILIGIDA GTSVIKSVAF DLSGRQLAMT AVPNSYEAVG RTGSVQELRR TWTDTVKTLA 
ELSARIENLP GRVAAIAVTG QGDGTWMIDG DGEPVGKGWL WLDARASAVV ERLRAESGDA
ERFARTGSGL AACQQGPQLR WMKDHAPEML EGAATAFHCK DWLYFNLTDK RATDPSEANF
TFGDFRTRQY CDDVIDFLGL KDLKHLLPEI VDGATTHHPL SAAAAAAAGL PAGTPVVLGY
VDVVCTALGA GLYEPGTDAG CSIIGSTGMH MRLAAGADDV RLNQNHTGYT MCMPIPNTYA
QMQSNMAATL NIDWILQFAG DLLKGMGIEK SKSDLLAHVD HWLAEAKETP LLFHPYISEA
GERGPFVDAA ARASFVGLSI NHGFGDMVHA VFDGLAFAAR DCYAEMGPLP ARVRLSGGAA
RSASLRRILG GALGASIQTS EREEAGAAGA AMIAAVSLGI HPTMADCVRE WVRPHHRPAE
PADKDLARRY DAIFPAYKQS RLALEPVWHA LSHATGTGNQ QERPQ