| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2153 |
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| Symbol | |
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| ID | 5323013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2221722 |
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| End bp | 2222567 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640791091 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001327821 |
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| Protein GI | 150397354 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01459] HAD-superfamily class IIA hydrolase, TIGR01459
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.240373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCAA TCCGTGAAAT TCCAGGTCTG TCTGCGATCG CCGGCGCCTT CGATGCCTTT
CTCGTCGATC AGTATGGCGT GCTGAGAGAT GGTCGCGGAC CTTATCCCGG CGCGGCGGAA
ACGCTTGTAC GACTGAAGCA GGCCGGAAAG CGGGTCATCG TCCTCTCCAA TTCCGGCAAA
CGCTCGACGG AGAACGACCG CCGGCTCGCG GAACTCGGTT TCGAGCGGGG AAGCTGGGAC
TGGTTTCTGA CCTCGGGAGA GGTTGCCTGG CGGCTTTTGA AACGGGAGTC CGAAGGTGAG
AATGGCGCAG CGCGCAAATG TCTTCTGATC AGTCGCGATG GTGATCTATC GCCGCTCAAC
GGCCTGAATT TCGTCCGCAC CGAGAGCGGC GATGAGGCCG ACACCGTGCT TCTGGCGGGG
AGCGAGGGCG ATGTCCACCC GCTTTCCTAT TACGAAGACC TGCTCGGGCC GGCCGCCCGC
CGGGGCGTGC CGTGCCTCTG CACCAATCCG GACAAGGTGA TGCTGACGCG GAGCGGCCCC
GCCTTCGGCG CGGGGCGCAT CGCCGAGCTT TACGAGGAGA TGGGGGGGCA TGTGCGCTGG
ATCGGCAAGC CCTTTGCCGA CATCTACGAC TTCGCTCTCG ATTTTCTCGG TTGCCCGGAA
CCCGGGCGGG TCTGCGCAAT AGGCGACAGC GTCGAGCACG ACATCGGCGG AGCCGCGTCG
GCGGGCTTGG CCTCGGTGCT CGTCGCCACG GGCATTCTGG AACACCGGTC GGACGAGGAA
CGCCGGCAGC TCTTCAGGGA GCACGGTGCT TCGCCCGATT TCATCCTTTC CAAATTTCTC
TGGTAG
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| Protein sequence | MSSIREIPGL SAIAGAFDAF LVDQYGVLRD GRGPYPGAAE TLVRLKQAGK RVIVLSNSGK
RSTENDRRLA ELGFERGSWD WFLTSGEVAW RLLKRESEGE NGAARKCLLI SRDGDLSPLN
GLNFVRTESG DEADTVLLAG SEGDVHPLSY YEDLLGPAAR RGVPCLCTNP DKVMLTRSGP
AFGAGRIAEL YEEMGGHVRW IGKPFADIYD FALDFLGCPE PGRVCAIGDS VEHDIGGAAS
AGLASVLVAT GILEHRSDEE RRQLFREHGA SPDFILSKFL W
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