Gene Smed_2123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2123 
Symbol 
ID5322983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2187984 
End bp2188322 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content63% 
IMG OID640791061 
Producthypothetical protein 
Protein accessionYP_001327791 
Protein GI150397324 
COG category[S] Function unknown 
COG ID[COG3453] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01244] conserved hypothetical protein TIGR01244 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.233135 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATTC GCCAGATCAA CGATGAGTAC TCGGTCTCCG GCCAGATCAC CGTCGACGAA 
CTCGACGAAA TCAAGGCACT CGGCTTCAAG TCCATCGTCT GCCATCGCCC GGATTTCGAG
GCGCCCGATC AGCCGACCTT CGACGCGATC TCCGCGCGTG CCCGGGAGCT GGGGCTCGAG
ATCACCCATA TTCCGGTCGG CCCGATGGGC GTTACCGCGG ACGCGGTGAA GAGCATGGTG
GACGCCCTCG ACGAGTTTCC CCGCCCGATG CTGGGTTACT GCCGCTCCGG CGCCCGCTCC
ACCGCCGTTT ACCAGCAGAC ATTGCACATT CGCGGTTGA
 
Protein sequence
MDIRQINDEY SVSGQITVDE LDEIKALGFK SIVCHRPDFE APDQPTFDAI SARARELGLE 
ITHIPVGPMG VTADAVKSMV DALDEFPRPM LGYCRSGARS TAVYQQTLHI RG