| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2117 |
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| Symbol | |
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| ID | 5322977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2180219 |
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| End bp | 2181868 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640791055 |
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| Product | putative ABC transporter ATP-binding protein |
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| Protein accession | YP_001327785 |
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| Protein GI | 150397318 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.129596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.211481 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGTC AGTTCATCTA TCACATGGCC GGGCTCAACA AGGCCTATGG CAACAAGAAG
GTCCTCGAGA ACATCCATCT CTCGTTCTAT CCGGAAGCGA AGATCGGCAT TCTCGGCCCG
AACGGGGCCG GTAAGTCGAC CGTGCTCCGG ATCATGGCGG GCCTCGATAC CGAATATACC
GGCGAGGCAT GGGTCGCCGA AGGTGCGAGG GTCGGCTATC TCGCACAGGA GCCTCAGCTC
GACGCTCAGA AGAACGTGCT CGAGAACGTG ATGGAAGGGG TCGCCGCCAA GAAGGCGATC
CTCGATCGCT ACAACGAGCT GATGATGAAT TATTCCGACG AGACCGCGGA CGAAGGCGCA
AGGCTCCAGG ATGTCATCGA TAGCCAGAAC CTATGGGATC TCGACAGCCA GGTGGAGATG
GCGATGGAAG CCTTGCGCTG CCCGCCGGCG GACGCGGATG TCGCCAATCT GTCCGGTGGC
GAAAAGCGCC GTGTCGCTCT TTGCAAGCTC CTCCTGTCGC AGCCCGAACT GCTTCTGCTC
GACGAACCGA CCAACCATCT CGATGCGGAA ACGATCGCCT GGCTCGAGAA GCATCTGCGC
GAATATCCGG GTGCCGTGCT GATGGTCACT CACGACCGCT ACTTCCTCGA CAACGTCACG
GGGTGGATTC TCGAGCTCGA CCGCGGCCGG GGAATTCCCT ACGAGGGCAA CTATTCCGCC
TATCTGCAGT CCAAATCCAA GCGCATGGCC CAGGAAGGGC GCGAAGAGGC TGCCCGCCAG
AAAGCGATCA GCCGCGAGCA GGAGTGGATC TCATCGAGCC CGAAGGCTCG CCAGGCGAAG
TCGAAGGCGC GTGTGCGCGC CTATGACGAG CTGGTCAAAG CGGCCGCGGA CCGGCGTCCC
GGGGACGCGC AGATCATCAT TCCCGTCGGC GAGCGCCTGG GACAGGTCGT CATCGAGGCG
GAGAATATTT CCAAGGGCTA CGACGACCAG TTGCTGATCG ACGGCCTGAC CTTCAAGCTG
CCGCCAGGCG GCATCGTCGG CGTCATCGGC CCGAACGGCG CTGGCAAGAC GACGCTCTTC
CGCATGATCA CCGGCCAGGA GCAGCCGGAC GGCGGTTCCA TCCGCATCGG CGACAGCGTG
CAGCTCGCCT ATGTCGACCA GAGCCGCGAT GCGCTCGATG CGAATAAGAC TGTCTTCGAA
GAAATTTCAG GCGGCAACGA CGTCATCAAG CTCGGCAAGC ACGAGGTCAA TGCGCGCGCC
TACTGCTCGG CCTTCAACTT CAAAGGCGGC GATCAGCAGC AGAAAGTCGG CACGCTTTCC
GGTGGCCAGC GCAACCGCGT GCACCTTGCA AAGATGCTGA AGTCCGGCGG TAACGTCGTG
CTGCTCGACG AACCGACCAA CGACCTCGAC ACGGAGACTC TGGCGGCGCT CGAGGATGCT
CTCGAGAACT TTGCGGGTTG CGCAGTGATC ATCAGCCACG ATCGCATGTT CCTCGACCGT
CTCGCCACCC ATATCCTCGC CTTCGAGGGC GACAGTCACG TCGAGTGGTT CGAAGGCAAC
TTCGAGGATT ACGAAAAGGA CAAGATCCGC CGTCTCGGTC CGGACTCGGT CAATCCCAAG
CGGGTAACCT ACAAGCGCCT GACGCGTTAA
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| Protein sequence | MARQFIYHMA GLNKAYGNKK VLENIHLSFY PEAKIGILGP NGAGKSTVLR IMAGLDTEYT
GEAWVAEGAR VGYLAQEPQL DAQKNVLENV MEGVAAKKAI LDRYNELMMN YSDETADEGA
RLQDVIDSQN LWDLDSQVEM AMEALRCPPA DADVANLSGG EKRRVALCKL LLSQPELLLL
DEPTNHLDAE TIAWLEKHLR EYPGAVLMVT HDRYFLDNVT GWILELDRGR GIPYEGNYSA
YLQSKSKRMA QEGREEAARQ KAISREQEWI SSSPKARQAK SKARVRAYDE LVKAAADRRP
GDAQIIIPVG ERLGQVVIEA ENISKGYDDQ LLIDGLTFKL PPGGIVGVIG PNGAGKTTLF
RMITGQEQPD GGSIRIGDSV QLAYVDQSRD ALDANKTVFE EISGGNDVIK LGKHEVNARA
YCSAFNFKGG DQQQKVGTLS GGQRNRVHLA KMLKSGGNVV LLDEPTNDLD TETLAALEDA
LENFAGCAVI ISHDRMFLDR LATHILAFEG DSHVEWFEGN FEDYEKDKIR RLGPDSVNPK
RVTYKRLTR
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