| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2099 |
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| Symbol | |
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| ID | 5322959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2159934 |
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| End bp | 2161142 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640791037 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001327767 |
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| Protein GI | 150397300 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4597] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.979172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.132387 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGTGC ATCATGCGAA AGCGGCCGAA CATGCGGTCG ACGACGATCT CCTCTCCGCT
CGCCGGCGCC GCAATCGGAT CAGGTACGGA GCCACCCAGT TTGCCGTGAT CGCGGCCGCG
ATCACCCTGG TGGTCCTTTT TGCGCTTGCC GTGAAGGAAG GACTTGCCCG GCACGGGATC
AGGTTCAGCT TCTCGTTTCT ATGGGACGCC GCCGGATTCG ACCTCAGCGA GGGCAAAACC
TTCGTCTTCG ACGGCACGTT CTGGCTGGCC TTTACGGAGT TCACCTCGGA GCGTTCGATA
GCGCAGGCAT TCGCCGCCGG AATCGTGAAC ACCACCAAGG TGGCGGTTCT CGCCATTGTT
CTGAGCACCA TGCTCGGAGT CCTGCTCGGT GTAAGTCGGC TCTCCACCAA TTGGGTGGCT
CGGAGCCTTT CCTTCTGGTG CGTCGAGTTC GTCCGCAACA CGCCGCTCCT TATCCAGCTC
GTCTTCTGGT ACTTCGCGGT CATCCTGCAT TTCCCACCTA TCGCGGCCGC GGCCGAATTC
TACGGCGTCG TCATCAGCCA GCAAGGCCTC TTTTTTCCGG CCCTCGTCTG GAAGGGCGAA
GGTTCGCCGG TCGCCATCGC AATGGCGACT GCTTGCTGGG TCGCAATTCT CGGACTGGTC
TTCGACAAGC ACAGACTGGT CCGCCGGGTT TGCATGGGTG CCATAGTCGT GCTTCCTTGC
CTGATGCTGC TGACCGGGAT CGTGGAACTG GATTTCCCCG TGGCATCGAA GTTTCGGGCC
AAAGGTGGTA CAGGCATGAG CCCCGAAATG GCGGCACTGC TTCTGGCGAT CGTCGTCAAC
AGCGCTTCCT ACATTGCGGA AATCGTGCGT GGAGCGATCG ATGCCTTGCC AAAGGGGCAA
TGGGAGGCGG CAGCCTCCCT CGGACTGAGC CGCCGCGATA CCGTCCACGA CATCATTCTC
CCGCAGGTCT TCCGGGTCGT GCTGCCTTCC TTCGGAAACC AGTATATCAG CCTCACGAAA
AACACGGCCC TCGGCATTGC GGTCGGATAT CCCGAACTCT TCAACATCTA CGGCACCATA
GCGAACCAAA CGGGCCATAG CCTCGAAGGC ATCCTCATCG TCATGGCGTC CTATCTGATC
CTTAGCTGGG CTATCAGCGC GACCGTCGCC TGGGCCGACC GCCGCCTGAG CAAACGCGGA
GCGATGTGA
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| Protein sequence | MNVHHAKAAE HAVDDDLLSA RRRRNRIRYG ATQFAVIAAA ITLVVLFALA VKEGLARHGI
RFSFSFLWDA AGFDLSEGKT FVFDGTFWLA FTEFTSERSI AQAFAAGIVN TTKVAVLAIV
LSTMLGVLLG VSRLSTNWVA RSLSFWCVEF VRNTPLLIQL VFWYFAVILH FPPIAAAAEF
YGVVISQQGL FFPALVWKGE GSPVAIAMAT ACWVAILGLV FDKHRLVRRV CMGAIVVLPC
LMLLTGIVEL DFPVASKFRA KGGTGMSPEM AALLLAIVVN SASYIAEIVR GAIDALPKGQ
WEAAASLGLS RRDTVHDIIL PQVFRVVLPS FGNQYISLTK NTALGIAVGY PELFNIYGTI
ANQTGHSLEG ILIVMASYLI LSWAISATVA WADRRLSKRG AM
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