Gene Smed_2090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2090 
SymbolmraW 
ID5322949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2149127 
End bp2150215 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content62% 
IMG OID640791027 
ProductS-adenosyl-methyltransferase MraW 
Protein accessionYP_001327758 
Protein GI150397291 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0275] Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis 
TIGRFAM ID[TIGR00006] S-adenosyl-methyltransferase MraW 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00955336 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAATCAG AGCAGTTCCG CGATTTTGAG AAAAGCGGAC ATGCTCTGGA GTGGAGAGGC 
GGGATGGTGA CGGATCAAGG CGGCAGGACT TCTGAAGCCG ATGGCGGACC GGTTCGTCAC
ATTCCCGTCC TCCTCGAGGA AGTTCTAGCA GCTCTTGAAC CCGCTCCGGG CAAAGTTATT
CTCGATGGCA CGTTCGGTGC CGGCGGTTAC GCGTCCGCCA TCCTCGATGC AGGTGCCGAG
GTCATCGCCC TGGACCGGGA TCCGACGGCG ATCGCCGCCG GGCAGTCGAT GGTAAGCGCC
AGCGGCGGCC GGCTCAGCCT TATCCATTCC CGTTTTTCCG GCCTCGCCGA GCATGCGCCC
GCCGAGGGTC TCGACGGCGT CGTGCTGGAC GTCGGCGTTT CGTCGATGCA GATAGACGAG
GCGGAGCGTG GCTTTTCTTT TCAGAAGAAG GGGCCGCTCG ACATGCGCAT GTCGGCCGCC
GGCGTCTCCG CAGCCGATGT CGTCAATCGC GCGAAGGTCT CGGATCTTAT TCGCATCTTC
GGCTTTCTCG GCGAGGAGAA GCAGGCCGGA CGAATTGCGC GTACCATCGA AAAGCGACGC
GCCGAGGCTC CGTTCGAGAC CACGCGCGAT CTCGCCAATC TTATCGAGAC GGTGACGCCG
CGTAAGGCGA AAGATAAGAT TCACCCGGCA ACGCGCGTCT TCCAGGCGCT GCGCATCTTC
GTCAATGACG AGCTCGGCGA ACTTGCAGCT GCGCTCTTTG CGGCCGAACG GGCGCTGAAG
CCCGGCGGTA GACTTGTTGT CGTCTCCTTT CATTCACTCG AGGACAGGAT CGTTAAGACG
TTTTTCCAGG ATCGCTCCGG CAAGGCGGGC GGTTCCCGCC ATTTGCCGTT GGTGACGGCG
CGCGCCGCAA CCTTCGCGCC AGTCGGCAAG CCTATGGTAT CGGCGAGCGA TGAAGAGGCG
TCACGCAATC CGCGTGCCCG GTCCGCGAAG CTGAGAGCCG GAATACGAAC AGCAGCTCCG
TCGCCGGGTG CCGATTTGTC CATTTTCAAC CTGCCGGAAC TGGCAAGCCT TGCAAGACTG
GGGGGCTAG
 
Protein sequence
MKSEQFRDFE KSGHALEWRG GMVTDQGGRT SEADGGPVRH IPVLLEEVLA ALEPAPGKVI 
LDGTFGAGGY ASAILDAGAE VIALDRDPTA IAAGQSMVSA SGGRLSLIHS RFSGLAEHAP
AEGLDGVVLD VGVSSMQIDE AERGFSFQKK GPLDMRMSAA GVSAADVVNR AKVSDLIRIF
GFLGEEKQAG RIARTIEKRR AEAPFETTRD LANLIETVTP RKAKDKIHPA TRVFQALRIF
VNDELGELAA ALFAAERALK PGGRLVVVSF HSLEDRIVKT FFQDRSGKAG GSRHLPLVTA
RAATFAPVGK PMVSASDEEA SRNPRARSAK LRAGIRTAAP SPGADLSIFN LPELASLARL
GG