| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2046 |
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| Symbol | |
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| ID | 5322905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2097741 |
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| End bp | 2099057 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640790983 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001327714 |
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| Protein GI | 150397247 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.419907 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.30363 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGGCC GCTACCAATG GCCTTGCATA CTGGCTGAAA CGCAAGCCGC ACTTTATTTT
AGCACGACAG GCCGTTTCGA AATGAGCTTT CTCTCCGCCA TACCCGCCAT CGCACTTCTT
GCCATGCTTC CCGTCCTCGC TTCTCTGCGG CGCATGCCGG TTGCCGGTGT TCGGGAAATC
GCGCTCGGCT GCGTATTGTC GGCGGCGTCG GCAGCGGCGC TGACCGTTGC GACGGCCATG
CAGGCGCCGA TCGCTGCAAT GTTCGGCTAT GCAGGTCTGG TCGTCACCCT CTTCTTTGTC
CTGCGAGGCC TTCAACGGTT CTTCGCGCTA TCGATGCCAA CCCCGCTTTT TCTGGTACTG
GCGTTCTCGA GCGGCGTGGT CGGGTTCATC ATTGCGCTTG GCGGCAATGG AAGTGCCGCC
GCCACCATCA TCGTCGTTGC GGGCGTGACC GCGCTCCCAC TTCTTATCCT CGGCCTGGCC
GCGGCCAATC GCTGGCCAAA GGAAATGCCG GTGATCCAGG TCGTCATTAT CGGCTCCGTC
GTCGTGGTCT TCACCGCCTT GGCTCATATC CTTGGCCCGT CGTCCCACTT CACGGCCGAG
CGATCGGGAT CGCCCGGCTT CATTCTGTTC GATTTCTTAG TCGTCACCAT GCAGGCGCTT
TGTCTTCCGC TTGTCTTCAT TGCCGTGATC CTCACGATGC AGGCGCGCAT CATCGCCGCG
TTAAGAGCCG CGATCGCTCG GGACGGGCTG ACCGGGGCGC TGTCGCGCGG AGCACTCATG
GAAGAAGGCG AGCAGATCTT CGCCGAGTGC CTGACCCGCC GAAGGCCGGC TGCCTTCCTG
TTGCTCGACC TCGATTTTTT CAAGCAGATC AATGATCAGT ACGGGCACGC CTGCGGCGAC
ATGGCACTCG CGCACTTTGC CGACACCGTC TCGACGTTCC TCGCAGGTCG GGGCGTTCTC
GGACGGATCG GAGGAGAGGA ATTCGGCATC GTCCTGCCGG ACCACACTGA AGAGCAGGCA
AAGGCGCTTG CCGAAGAGAT CTGCCGCATC GTGCGCGAGA CGCCTGCCGG CCGCTCTCAT
CAGCGCATCC GTTTGACCGT GAGCATAGGG ATCGCAGCCG CCACCGCGCA CGAGACGATT
GCGGATGTGA TGATCCGCGC AGACCTGGCC CTCTACGACT CCAAGGCGGA CGGTCGCGAT
CGTTGCACGA TCGCCAGGGA TCGCCGGATT GACTCGAGCG CCCGCGCCCT TGCAGCAGCC
GCCGCGCAAT TGCGGGAAGC GCGCGCCGGC CGGCCGGAAT TGCGCCACTC GGCGTGA
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| Protein sequence | MRGRYQWPCI LAETQAALYF STTGRFEMSF LSAIPAIALL AMLPVLASLR RMPVAGVREI
ALGCVLSAAS AAALTVATAM QAPIAAMFGY AGLVVTLFFV LRGLQRFFAL SMPTPLFLVL
AFSSGVVGFI IALGGNGSAA ATIIVVAGVT ALPLLILGLA AANRWPKEMP VIQVVIIGSV
VVVFTALAHI LGPSSHFTAE RSGSPGFILF DFLVVTMQAL CLPLVFIAVI LTMQARIIAA
LRAAIARDGL TGALSRGALM EEGEQIFAEC LTRRRPAAFL LLDLDFFKQI NDQYGHACGD
MALAHFADTV STFLAGRGVL GRIGGEEFGI VLPDHTEEQA KALAEEICRI VRETPAGRSH
QRIRLTVSIG IAAATAHETI ADVMIRADLA LYDSKADGRD RCTIARDRRI DSSARALAAA
AAQLREARAG RPELRHSA
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