| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2042 |
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| Symbol | |
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| ID | 5322901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2094538 |
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| End bp | 2095524 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640790979 |
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| Product | monosaccharide-transporting ATPase |
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| Protein accession | YP_001327710 |
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| Protein GI | 150397243 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0809219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.224374 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACAAC GTACGTTCCT GCAAAGCTTC GTCTCGAAGC CGGAATTCGG TCCGCTCGTG
CTTCTGGTGC TCGAGCTTAT GGTCTTCTGG TCTTTCAACT CGGATTTTCT GTCGCTTCCG
AACATCAGCA ATACGCTGTC CTTTACCGTC GAACTCGGCC TGATCGCACT GGCAATGACT
TTGCTCATGA CGGCGGGTGA GTTCGATCTT TCGGTCGGCT CGGTATTCGG CTTCTCGGCT
GTCCTGATGT GGACCTTGTT CAACAGCGAG ATGATGCCGC TCGGGGTCGC ATTCCTCGTG
GCGATTGCCG CCAGTCTGCT GATCGGCTTT GTCAACGGAT GGTTCGTCAC GAAGCTGAAC
ATACCGTCCT TCCTCGTGAC GCTCGGGATG CTCCTGGTCG TCCGAGGCAC CGCTCTCTAC
GTCACCGACG GTTTCCCGCA GCGGACCTGG AATGCGGAAG GCAACCTGTT TGCCAACGTT
CTGGCTGGAA GCTACTTCAT CGGCAGTTTC CGGATGTACA TGTCGGTGAT CTGGTTCGCG
CTGGCAGCGG TTGCGGCACA TTACGTGCTC ACAAAGACAA AGGCTGGAAA CTGGATCCAG
GCTTCGGGAG GCAATCCGAA CGCTGCACGC GCGCGCGGGG TCAACGTGAG CCGCACGAAG
ATATGCCTGT TCATGGCATC ATCCGCGATG GCGTCGCTTG CCGGCATCAT CAGCTCCATC
CGTACCTCTG CGGCCAACCC CAACAGCGGC ACCGGCTACG AGCTTGAGGT GATCGCCATG
GTGGTGATCG GCGGCACCGT GCTCACCGGC GGCCGCGGGA CGATCATCGG CACGGTGCTC
GGCATTTTCA TTCTGCGCGT CATGCGCAAC GGCATCGTCA TGATCGGCGT GCCCGGCCTT
GCCTACAACA TCTTCATCGG CGCGATCATC CTCGGAATGA TGGCACTGCA CTCATGGCTG
GAACGCCGAC ACAACTCAGG AGTATAA
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| Protein sequence | MQQRTFLQSF VSKPEFGPLV LLVLELMVFW SFNSDFLSLP NISNTLSFTV ELGLIALAMT
LLMTAGEFDL SVGSVFGFSA VLMWTLFNSE MMPLGVAFLV AIAASLLIGF VNGWFVTKLN
IPSFLVTLGM LLVVRGTALY VTDGFPQRTW NAEGNLFANV LAGSYFIGSF RMYMSVIWFA
LAAVAAHYVL TKTKAGNWIQ ASGGNPNAAR ARGVNVSRTK ICLFMASSAM ASLAGIISSI
RTSAANPNSG TGYELEVIAM VVIGGTVLTG GRGTIIGTVL GIFILRVMRN GIVMIGVPGL
AYNIFIGAII LGMMALHSWL ERRHNSGV
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