| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2041 |
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| Symbol | |
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| ID | 5322900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2093525 |
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| End bp | 2094469 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640790978 |
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| Product | ABC transporter binding protein |
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| Protein accession | YP_001327709 |
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| Protein GI | 150397242 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00512093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.331849 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGAAGA AAGCTATAAC ATTGCTCTCG GCGGCGGTCA TCGCTGCGGG AGCAGGTTTC
GTTTCAAGCG CATATGCGCA AGGCAAAACC TACTACTGGG TCTCGCACGG CTCTCCGGCG
GACCCGGTGT GGACCTATTT TCTGGCAGGT GCAAAACAGT GGGCCGAGGA TACCGGCAAT
ACGGTAAACA CGTCATTCCA GAACGGTGAC GTCCCTGCGC AGCAGGAAGC GATTAGAGCG
GCGATTTCGG CGGGTGCGGC CGGCATCGCA ACCACCACGC CCGATCCGGG CAGCCTCAAC
GAGGTCGTCA AGGAAGCAAA AGCGGCCGGC ATTCCGATCA TCAATTTCAA CACACCGGAC
CCGCAGGCCG GCTTCGACGC CTATGTCGGA GGCGACAACA GAGCTTTCGG AAAGAACTGG
GCGCAATATC TCGTCGACAA GAAGCTCGTG AAATCCGGCG ATTTCGTCTG GATGCCCGTC
GAAGTTCCCG GCGCGACCTA CGGCGTTCAG GAAGAGGAAG GCATTGCCAG CGTCTTCAAG
CCGTTGAACA TCACCTGGGA AGTCACCGAC GCAACGCTTG ACCAGGCGGA AATCATCACC
CGCATGTCAG ACTACCTGAC TGCAAACCGT TCGAAGATCA AGGCGATCAT CGGACTGGGC
GACCTCGTCA CCGGCAGCAT CAAGCGCGTC TTCGACCAGG TCGGCGTAAA ACCGGGAGAA
ATTCCCGTGG TCGGCTGGGG CAATTCGATA GACACCACCC AGGAGGTTCT GACGGGCTAC
GTGAATGCCG CCCAATGGCA AGACCCGCAG GCGACCAGCT ATATGGCACT GTCCATGGCT
GCCATGGCAT CGAGCAAGAT ACCGCCAGGT TTCAATATCA TCACCGGCGC GCTCTACGAA
AAGGATACGG CAGAGCTCTA CGACAAGATC CTCTCCGGCA AGTAA
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| Protein sequence | MLKKAITLLS AAVIAAGAGF VSSAYAQGKT YYWVSHGSPA DPVWTYFLAG AKQWAEDTGN
TVNTSFQNGD VPAQQEAIRA AISAGAAGIA TTTPDPGSLN EVVKEAKAAG IPIINFNTPD
PQAGFDAYVG GDNRAFGKNW AQYLVDKKLV KSGDFVWMPV EVPGATYGVQ EEEGIASVFK
PLNITWEVTD ATLDQAEIIT RMSDYLTANR SKIKAIIGLG DLVTGSIKRV FDQVGVKPGE
IPVVGWGNSI DTTQEVLTGY VNAAQWQDPQ ATSYMALSMA AMASSKIPPG FNIITGALYE
KDTAELYDKI LSGK
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