| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2039 |
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| Symbol | |
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| ID | 5322898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2091126 |
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| End bp | 2092163 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640790976 |
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| Product | regulatory protein LacI |
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| Protein accession | YP_001327707 |
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| Protein GI | 150397240 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.865704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.671678 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGGAA AATGCCACGT GGTGAAATCG CGGCCGAAAG TGGATGAAAT TGCCCGCATG
GCCGGCGTGT CGAAGGCGAC CGTCGACCGG GTGCTCAACA ATCGGCCGGG GGTGCAGGAG
CATACGCGCG CTCACGTGAT GGCCATCGCT GCAAGCCTCG CCGAAACGCC GGGAGAAGTC
TCGAACCCCG GTAAAATCGG CCTGGACTTC ATCCTCGCGG GCGGCACGAA CCCCTTTATC
GCGGATCTGG CGCTCCACCT GGAGCGGCAG GCCGCGGTGC GACCGGATGT AGACGTCATC
ATCCATCGGC TGAACGGCAT CGAGCCCGAG GAAATTGCCG AGAAACTGAC AAGCCTTCGC
CCCTCCTGCA AGGGCGTCGG CCTGATCGGG CTCGACAGCC CGGCGGTCCG GGAGGCGTTG
CGGCAGCGGA TCGCGGCGGG CGTCCCGGTG CTCACCCTTG TCTCCGACAT CAGTCACGTC
GGGCGGGTGA GCTATGTCGG CATTGACAAC CGGGCCGCGG GGCGGCTGGC CGGATACCTG
ATCGGGCGCT TCGTGCCGGG CGCGAGGGGA AAGATCGCGC TGATTGCCGG TGCCCTTGCC
TATCGCGGCC ATGAAGAACG CGAAATGGGT TTCCGGCACG TGCTCGACGA GCGGTTCCCT
CTTCTGGAGA TCATCGCCGT TCGTGAGGTC AAGGAGAACC CCGAGCGCGC TTACAGCGAA
GTGCGCACGC TGCTCGCCGA GGAGCCCGAA CTCGTCGCGA TCTACTGCAT CGGCGCCGGC
CATGCAGGCA TTGCTCGCGC CTTGAAGGAG GCCGGGCGGG AGAAGTCCCT GATCTTCGTA
GGGCACGACC TCACCGACGA TACCCGTCAG TATCTGCTGA GCGGCGTCAT GGACGCGGTG
ATCGATCAGA ACGCCGGGGT CGAAGCGCGC GAAGCCATCG ACCGTCTCGT GCGCGCCACC
CGCAACGAGA CCTCGATCTC TGCGGCGACG ATCCGCATTC AATCGGTTTT CAGCGAAAAC
ATCCCAGCCG ACGCCTGA
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| Protein sequence | MTGKCHVVKS RPKVDEIARM AGVSKATVDR VLNNRPGVQE HTRAHVMAIA ASLAETPGEV
SNPGKIGLDF ILAGGTNPFI ADLALHLERQ AAVRPDVDVI IHRLNGIEPE EIAEKLTSLR
PSCKGVGLIG LDSPAVREAL RQRIAAGVPV LTLVSDISHV GRVSYVGIDN RAAGRLAGYL
IGRFVPGARG KIALIAGALA YRGHEEREMG FRHVLDERFP LLEIIAVREV KENPERAYSE
VRTLLAEEPE LVAIYCIGAG HAGIARALKE AGREKSLIFV GHDLTDDTRQ YLLSGVMDAV
IDQNAGVEAR EAIDRLVRAT RNETSISAAT IRIQSVFSEN IPADA
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