Gene Smed_2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2020 
Symbol 
ID5322879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2069712 
End bp2070317 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content62% 
IMG OID640790957 
Productglutathione S-transferase domain-containing protein 
Protein accessionYP_001327688 
Protein GI150397221 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTACGC TGATCCATGC GCCCTTGTCG CGTTCGTCGC GGATCGTCTG GCTGCTCGAG 
GAGCTCGGTG CCGAATACGA GATCCGCTAC GTCAACATTC GCCGCTGGGA CGGATCGGGT
GCTCCCGACG AAAAGAATCC GCATCCGCAC AAGCAGGTTC CGGCACTTCT GCACGATGGG
ACATTGATCT GGGAATCGGT CGCCGTCGTG CAATATCTGA CGGATCTCTA TCCCGACTGC
AGCCTCAGCC GCCCGCCCGG GCACCCCGAG CGCGGCGCCT ATCTGTCGTG GCTTGCCTAT
TATGCGGGCG TCATCGAGCC GACTGCCCTG GCGCATATTT CCGGAGTGAC GGTGAACAAT
CCGGGGCTCG CCCGGCTGTA CACCGAAATG TGCGCGCATG TGATCGAGGC GCTCACGCGG
CACACCTATC TGCTCGGTGA GTCCATGAGC GCCGCCGATC TTTTGCTTGC AAGCGCATTG
CAGTGGATGC GCAAGATCCT GCCGGAGAGC GACGTGATAG ACCGCTACAT TCGGGTGGTC
ACCGACCGCG CCGCCCTGGT TCGCGCACGC GAGATCGACA GCAAGCCGAG TGGTTTTCAT
GACTGA
 
Protein sequence
MLTLIHAPLS RSSRIVWLLE ELGAEYEIRY VNIRRWDGSG APDEKNPHPH KQVPALLHDG 
TLIWESVAVV QYLTDLYPDC SLSRPPGHPE RGAYLSWLAY YAGVIEPTAL AHISGVTVNN
PGLARLYTEM CAHVIEALTR HTYLLGESMS AADLLLASAL QWMRKILPES DVIDRYIRVV
TDRAALVRAR EIDSKPSGFH D