Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2018 |
Symbol | |
ID | 5322877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2067873 |
End bp | 2068961 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640790955 |
Product | HflK protein |
Protein accession | YP_001327686 |
Protein GI | 150397219 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTGGA GCAATCAGAA TGGCGGCGGC GGTGGCCCTT GGGGCGGCGG CGGCGGCAAT CAAGGGCCAT GGGGCCAGGG GCCCAACCGG CCACGCGGCG GAAGAGGTGG TCCGCCGGAT CTGGAGGAGA TCATCCGGCG TGGCCAGGAT CAGCTGAAAA GCGTGGTTCC CGGGGGCTTC AACGGCGGGA TCTTCGTCAT TGTCGGCCTG CTGGTTCTCG GTTTCATCCT GCTGAACTCC ATCTATACCG TTCAGCCGGA CGAACGCGGC GTTGAGATGC GCTTCGGCAA GCCGAAGGAA GAAATCTCCA TGCCGGGCTT GCACTATCAC TTCTGGCCGC TTGAAACGGT AGAGATCGTC AAGGTGACCG AGCAGCAGCA GAATATCGGC GGTCGCACGG GCCAAACAAA TTCCGGCCTG ATGCTGAGCG GCGATCAGAA CATCGTCAAC GTGCAGTTCT CGGTGCTGTT TTCGGTTACC GATCCGAAGG CGTATCTCTT CAATGTCGAA AACCCGGCCG ACACGCTGCA GCAGGTGGCC GAAAGCGCAA TGCGCGAGGT CGTCGGACGC CGTCCTGCGC AGGACATTTT CCGCGACAAC CGTCAGGCGA TCGCCGCGGA TGTGAAGAAC ACGATCCAGG CGACCATGGA CAGCTATGGC GCCGGCATAT CGGTGAATAC CGTGGCGATC GAGGATGCCG CCCCGCCACG CGAAGTGGCC GATGCCTTCG ACGAAGTGCA GCGTGCCGAG CAGGACGAGG ATCGCTTCGT CGAAGAGGCC AACCAGTATG CCAACCAGGT GCTCGGCAAG GCGCGCGGCC AAGGCGCGCA GATCCGGGAA GAGGCGGCCG CATACAAGGA TCGGGTGGTC AAGGAGGCTC AGGGTGAGGC TCAGCGCTTC ATCTCAGTCT ATGACGAGTA TTCCAAGGCT CCGGAAGTCA CGCGCAAGCG GCTCTATCTC GAAACGATGC AAGGCGTTCT CGGCAAGTCC AAGAAGTTCA TCCTCGACGA GAAGAACGGC CAGGGTGTGC TGCCCTATCT GCCGCTCAAT GAAATCGGCA GGCCCGTGCA GTCGGGAGGA AACCAATGA
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Protein sequence | MPWSNQNGGG GGPWGGGGGN QGPWGQGPNR PRGGRGGPPD LEEIIRRGQD QLKSVVPGGF NGGIFVIVGL LVLGFILLNS IYTVQPDERG VEMRFGKPKE EISMPGLHYH FWPLETVEIV KVTEQQQNIG GRTGQTNSGL MLSGDQNIVN VQFSVLFSVT DPKAYLFNVE NPADTLQQVA ESAMREVVGR RPAQDIFRDN RQAIAADVKN TIQATMDSYG AGISVNTVAI EDAAPPREVA DAFDEVQRAE QDEDRFVEEA NQYANQVLGK ARGQGAQIRE EAAAYKDRVV KEAQGEAQRF ISVYDEYSKA PEVTRKRLYL ETMQGVLGKS KKFILDEKNG QGVLPYLPLN EIGRPVQSGG NQ
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