| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2003 |
|---|
| Symbol | |
|---|
| ID | 5322862 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 2054300 |
|---|
| End bp | 2055034 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640790940 |
|---|
| Product | methyltransferase type 11 |
|---|
| Protein accession | YP_001327671 |
|---|
| Protein GI | 150397204 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.428029 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACAGA ATATTTACGA CAAACCCGAA TTCTTCGCCG GCTACAGCCA ACTGGGCCGG
TCCCTGCATG GGCTGGACGG TGCCCCGGAA TGGCCGGCGA TCCGCGCGAT GCTGCCGAAA
TTCGACGGCC TGCGCGTCGT CGATCTCGGC TGCGGCTTCG GCTGGTTCGC GCGATGGGCG
CGGGAGAACG GAGCCTCTAG TGTTCTCGGT ATTGATTTGT CCGAGAAGAT GATCGCACGG
GCGCGCAATG AGACGAGTGA TCCGGCCATC GAATACCGGA TTGCCAATCT TGAGGAGCTG
GTTCTTCCCG AAGCGCGTTT CGACTTCGCC TATAGTTCGC TTGCCTTCCA CTACATCGAA
GACTTCGACC GCCTGCTGCG CACGATCCAC GCCAGCCTGT TGCCCGGGTC CAATTTCGTC
TTCACCATCG AGCATCCCAT CTACATGGCT CCGACCAACC CAGGCTGGAC GGTCGATTCG
GAGGGGCGCC GTATCTGGCC GCTCGATCGC TACGCAGTCG AAGGAACACG GCTTACCGAC
TGGCTCGCCA GGGGCGTCGT CAAGTATCAC CGAATGTTCG GCACGACGTT GAACAGTCTG
CTTGCGGCCG GCTTCGTGAT CCGCCGCGTT CAGGAGTGGA GCCCCACCGC CGAGGAGATC
GCCCGAATTC CCGACCTGGC GGAAGAGGTC GACCGGCCGA TGATGCTGCT CCTTGCCGCG
CAGAGAGAGG CTTAG
|
|---|
| Protein sequence | MAQNIYDKPE FFAGYSQLGR SLHGLDGAPE WPAIRAMLPK FDGLRVVDLG CGFGWFARWA
RENGASSVLG IDLSEKMIAR ARNETSDPAI EYRIANLEEL VLPEARFDFA YSSLAFHYIE
DFDRLLRTIH ASLLPGSNFV FTIEHPIYMA PTNPGWTVDS EGRRIWPLDR YAVEGTRLTD
WLARGVVKYH RMFGTTLNSL LAAGFVIRRV QEWSPTAEEI ARIPDLAEEV DRPMMLLLAA
QREA
|
|---|
| |