Gene Smed_2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2000 
Symbol 
ID5322859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2052047 
End bp2052706 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content65% 
IMG OID640790937 
Productnitrile hydratase 
Protein accessionYP_001327668 
Protein GI150397201 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.58695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGTC CGCATGATCT CGGCGGTCAG CATGGCATGG GCCCGATCGC TCCGGAATGG 
AACGAGCCCA CGTTCCACGC GGAATGGGAG AAGCGTGCGC TTGGCATTAC GCTTTCCTGT
GGCGCTTTCG GCGCCTGGAC GCTGGACGAA AGCCGGCACG CGCGTGAAAG CCTGCCCCCG
GCGACCTATC TCTCGGCGAG CTATTATGAA ATCTGGACAC GAGCCCTGGA AACGCTGCTC
AAGCGCCACG GCTTCCTGAC AGAAGCCGAG CTCGACGCCG GCCGTATGCT CGACAAGTGG
CGGGAGCCCA AACGGGTGCT CGCAGCGGAC ATGGTTGCCG GCGTGCTCGC CAAGGGAGCT
GCGTGCGACC GGCCGGTGGA AGCGCCGCCG CGCTTTGCCG CCGGCGAGAG CGTGCGTACG
AAGAACTTCA ATCCGGAGAG TCACACACGC CTCCCGCGTT ACGCCCGTGC CCGGAGGGGC
GTGGTGGAGG CCGTACAGGG CAGCTTCGTC TTTCCGGACG ACAACGCTCA CGGCAGGGGC
GAGAATCCGC AATGGCTCTA TACCGTCGTC TTCGGCGCCC GGGAGATCTG GGGCGAGGGC
GCGGACCCGA CGCATACCAT CTCCATCGAT GCATGGGAGA GCTACCTTGA ACCTCTATGA
 
Protein sequence
MNGPHDLGGQ HGMGPIAPEW NEPTFHAEWE KRALGITLSC GAFGAWTLDE SRHARESLPP 
ATYLSASYYE IWTRALETLL KRHGFLTEAE LDAGRMLDKW REPKRVLAAD MVAGVLAKGA
ACDRPVEAPP RFAAGESVRT KNFNPESHTR LPRYARARRG VVEAVQGSFV FPDDNAHGRG
ENPQWLYTVV FGAREIWGEG ADPTHTISID AWESYLEPL