Gene Smed_1991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1991 
Symbol 
ID5322850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2041868 
End bp2044939 
Gene Length3072 bp 
Protein Length1023 aa 
Translation table11 
GC content62% 
IMG OID640790929 
Productadenylyl cyclase class-3/4/guanylyl cyclase 
Protein accessionYP_001327660 
Protein GI150397193 
COG category[R] General function prediction only 
COG ID[COG3899] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0171462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGTG ATAGCCGGAC CAAAACACCA CGAAAAGCGC CCGAGCGTGG ACAAGGCTCG 
GGCGGCTCTT CCGTGCGTGG AGGCGAGCGG CGCATCGTCA CGGCACTTTG CTACGATTTG
GTCGGCTCGA CCGATCTGAT GCATGTCATG GATATCGAGG ACTACCAGGA ACTGATGTCC
GCGTTCCAAT TCGCCTCGAA GCAAGAAATT GCATCGCATT CGGGCGTGAT GCAGCACGAG
GCCGGCGATG GCGGCGTTGC GCTTTTTCCG ATCGAGCTCG AGGCCAGGGA CGCTGCCTCA
CTCGCAATTC GGGCAGGACT GGGCATTGTC GAAGCCTGCA AGCGGGTAGG TCGCGAGGCG
GGGCAGGACG ATCTGCAGGT TCGCGTGGGC ATCGCCACTT CCGTCGCCCT GGTTCGCGAA
GCGTCACGCG AGGGCTGGGC TCAGGAGCCG GTCACGGGCG CCGCTCTTGC CATGGCTGCC
CGCCTGCAGG CGATCGCTGC GCCGAGCAGC GTGCTTGTTT GCGAGGAAAC ACGCCACCTT
GCAGGCAGGT CCTATTCATT TGTGTTTGAA GGCAGCAAGG AACTCAAGGG CTTTACGACA
CCTGAGAAAG TGTGGCGCGC GCTCGGTCAC AAGGTAGGCA TAGACCGCTT CTATGCTTTC
GGCCGGCTCG GCGGACCCTT GATCAACCGA GAGAACGAAC TGAATACCAT CGGGCGGATC
TGGGACGGTG TTCTTGCGGG ACAAGGCTCC GTGGTCCTTA TCGAGGGTGA TGCCGGCATC
GGCAAATCGC GGTTGCTGAG GGAAATCCGC AGACGAACGC GCGGCCGGCG TTCCAAGCTC
CTCTTCTTCC AGTGTCTCCC TGGCGGGTTC CGCTCGACGC TTCATCCTCT CCTCAACAAC
CTTCCGGGAT CGGTATCCGG CGGCGGCCAG ATGGGTCCGA CGGCCGCCGC CGTAGCGGCT
CTGTTCGAGC GCAACGGTAT CAGGGATGCG GAGGTCGTCG ATATCTTTGC CTATCTGCTC
GGGGCGCAGG GAAGCCGGCA GCCGTCGAGC AAGGATCCGA AGGCGATCCG CGAAAGGGCG
CATCGCGCCC TGCTTCGTGC ATTGGAAGCC ATGTGCCGAA GTGGGCCGGC CGTCGTGGCC
GTCGAGGACA TCCATTGGAT AGACCCGACA TCGCAAGACC TTCTCGGCGA AGCTGCCAGG
ATAATCGGAC AATTCCCAAT CCTACTCGTC ACGACATCGC GTCCTGCCTC TGCGTCGGAA
TGGCTGGATA TAGCCAGCCC GACGCGCCTG CCGTTGCGGC CTCTCGATCC GGATGAGACC
AGACTGGCCA TAAAGGCAAA ATGGCCGGAG CATCGCCTCG ACCTGCTTCC CGATCTCTTC
GACGCGACGG AACGGATCTC GGGCGGCGTT CCACTGTTCA TAGAAGAGAT CTGCCAATGG
GTGTCGCAAA ACGTCGAACC TGACACGATG CGATTGTCGG AGAGCGCCAA TCCCACGCAT
GTGTCGGCGT TCGAATCGAT ATTGGCGTCC CGCCTGCAAC AATTGGGCAC GGCCAGGGAG
GTGGCACGCG CGGCGGCGGT AGCCGGCACG CAGGTGACCC TGCCCCTGCT TCGGGCTCTC
CTACCCGATT TCGGCAAGAG CGCACTTGCA AACGCTGCCG ATACCCTCTG CGAAACCGGA
TTTCTGACGC GGATAAGGTT GCCGGGACGG ACCGCCTATG GGTTCCGGCA TACGCTGATA
CAGGAAACGA TCTACAAATC CGTGCTGCGT AAGCAGCGGC AGGTGCTGCA TCGGCGGCTC
TTCACGACAG TAAACCAAAA TCGCGGCATC GCCGCATGGA TTGATACGGG CGCTCTTGCC
GAACATGCGG AGCGGGCGGG ACTCCTCGAA GAGGCTGCCC CCTTGTTCAT CACTGCGGGA
AAGGAAAGTT CGAGCCGGTC CGCGATGATC GAGGCGAAAC AGTTTCTGGA ACATGCCCTG
GATCTCTGCG GCCAACTGGG CGAGAGCGAC ACCGCCGAAC CTCTGAAGCT TTCAGCGTTT
ACGGCGCTCG GTCCGATTCT GATAGGAGCA GTCGGTCTGA GCTCCGAGCC CGCGCGCAGG
CTTTACGAGG ACGCGGTCGA GATTGCCCGT CAGCGGCCGC TGTCCGAGCA GTCCCAATGG
TTTCCGATAT ACTGGGGTTG GTGGCTTACG GGATCGAATT TTCGCGTCAT GCACGACCGC
GCTCTGGAGG TGCGGTCGAT GCTGTCGAAG GCCAATGAGC CGGAAATCCA GCTCCAGGTC
AATCACTGCA TCTGGGCGAT CGATTTCAAT CTCGGCCGCC ATCGGGAAAC GCAGGAGGCG
ATCAAGGCGG GCCTTGCGCT CTATGACGAA AAGCGGGCCA AAGAGAGCCG GACGGAGTTC
GGTGGGCATG ACGCCAAGGT CTGCGGCCTC GGCCAACTCG CACTCTCCCT GTGGCTCACA
GGACGCACCA AGGCATCCGA CGCGGCGCTT TCGAGAATGA TCGCTTTCGC GGATCGGATA
GCGCATGCAC ACAGCAAGGC GCATTCCCTG GACACAGAAG CGGTGTCGGC CTTTTACCGG
GACGATTTCG AAGGGCTCAC CCGTATTTCC CTGCGAATGG CGGATTTTGC CCAGAGGCAC
AAGATGCAGT CTCTGTCCGG CCTCTCGAAT CTCTTCGGCG GCTGGGCCGA GGCACATCGC
ACGAGTCTTG CGAGCGGGCA TGCCTTGTTC CAGAGCGGCT TGTCTCAATT GCGCGAGCTC
GGTGCCGTCG CGGATCTGCC GATCTATCTT TGCATGCACG CAACGCTGCT GGGTCTTGCC
GGAAGGATCG AACCGGCGAT CAACGTGGTG AATGAGGCGA TCGGGAAGGG TGAGGAAACC
GGTCACGCCT ACTGGCTGGC GGAGTTGCAC CGGTGCCGTG CAATTCTTCT GGCGCGTACA
GGGGAGCGTA AGGAAGTTGT TGCTGCGGAC CTGCGCTGCG CTATCGAGAT CGCTGAGAGC
CAAGGGGCGA CGGCGTTGCT CAGGCGGGCT CGAAAATCGA CGCGGGAGCT CGGCATTGTC
ATCAGGCACT GA
 
Protein sequence
MLRDSRTKTP RKAPERGQGS GGSSVRGGER RIVTALCYDL VGSTDLMHVM DIEDYQELMS 
AFQFASKQEI ASHSGVMQHE AGDGGVALFP IELEARDAAS LAIRAGLGIV EACKRVGREA
GQDDLQVRVG IATSVALVRE ASREGWAQEP VTGAALAMAA RLQAIAAPSS VLVCEETRHL
AGRSYSFVFE GSKELKGFTT PEKVWRALGH KVGIDRFYAF GRLGGPLINR ENELNTIGRI
WDGVLAGQGS VVLIEGDAGI GKSRLLREIR RRTRGRRSKL LFFQCLPGGF RSTLHPLLNN
LPGSVSGGGQ MGPTAAAVAA LFERNGIRDA EVVDIFAYLL GAQGSRQPSS KDPKAIRERA
HRALLRALEA MCRSGPAVVA VEDIHWIDPT SQDLLGEAAR IIGQFPILLV TTSRPASASE
WLDIASPTRL PLRPLDPDET RLAIKAKWPE HRLDLLPDLF DATERISGGV PLFIEEICQW
VSQNVEPDTM RLSESANPTH VSAFESILAS RLQQLGTARE VARAAAVAGT QVTLPLLRAL
LPDFGKSALA NAADTLCETG FLTRIRLPGR TAYGFRHTLI QETIYKSVLR KQRQVLHRRL
FTTVNQNRGI AAWIDTGALA EHAERAGLLE EAAPLFITAG KESSSRSAMI EAKQFLEHAL
DLCGQLGESD TAEPLKLSAF TALGPILIGA VGLSSEPARR LYEDAVEIAR QRPLSEQSQW
FPIYWGWWLT GSNFRVMHDR ALEVRSMLSK ANEPEIQLQV NHCIWAIDFN LGRHRETQEA
IKAGLALYDE KRAKESRTEF GGHDAKVCGL GQLALSLWLT GRTKASDAAL SRMIAFADRI
AHAHSKAHSL DTEAVSAFYR DDFEGLTRIS LRMADFAQRH KMQSLSGLSN LFGGWAEAHR
TSLASGHALF QSGLSQLREL GAVADLPIYL CMHATLLGLA GRIEPAINVV NEAIGKGEET
GHAYWLAELH RCRAILLART GERKEVVAAD LRCAIEIAES QGATALLRRA RKSTRELGIV
IRH