Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1989 |
Symbol | |
ID | 5322848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2039871 |
End bp | 2040647 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640790927 |
Product | TfuA domain-containing protein |
Protein accession | YP_001327658 |
Protein GI | 150397191 |
COG category | [S] Function unknown |
COG ID | [COG3482] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.322278 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCCG ATGGTCCGAT TCTGGTGTTC CTTGGTCCGA CCCTGCGGCT TGCCGAGGCG GAAAAAATCC TCGATGCCGT TTATCTGCAG CCGGCTGCGC AAGGTGACTT TCTGCTTGCT GCGCATGCCT TTCGTCCGAG CGCCATGGTT CTGATAGACG GACAATTCCA GGACAGACCG GCGGTCCGGC ACAAGGAAAT CCTCTGGGCG ATGGCGCAGG GGATTGTCGT CATCGGAGCC GCCAGCATGG GCGCGCTCAG AGCAGCGGAG CTTGACGCTT TCGGCATGAT CGGCGTCGGC CTCATCTACA GGTGGTATCG GCGCTTCAGC CTTGGTCCGC TTTCCGACGC CGCGCCAGAC GATGCGATTG CCGTGCTTTC GGGACCGCCG GAACTCGGTT TTCTTCCTTT GACGGATGCA CTTGTCGACC TGCAGCGGAC CTTTTTCGCC TTGTCGCGAA GCGGTGTCAT CCTCCCTTCG GAGCGCGATC GGCTTACAAC TATCGCTAGA GATCTGAACT TCCGGGAGCG TTCCCTTGCG GCAGTCTTTC GAGCGGCGGG CCGCGCGCCC GACAGGAGCG GCGAACTCAG AGCGCAAATC ATCGGGCAGA AGCGTCGCGA TGCGCTGGAT GCGCTGCGCA AGGCTCCGGT CCTTCTGGCG CAGCACCGTC AGGCGCACCG CGCTGATGGC TGGATCGCAA CGAACACCTT CCTCCGGGAC CTAGAGGCCG GCGGCATTGA CTCGAATTTG GTGAACACCT ATAAATTGAA ACCATAA
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Protein sequence | MAADGPILVF LGPTLRLAEA EKILDAVYLQ PAAQGDFLLA AHAFRPSAMV LIDGQFQDRP AVRHKEILWA MAQGIVVIGA ASMGALRAAE LDAFGMIGVG LIYRWYRRFS LGPLSDAAPD DAIAVLSGPP ELGFLPLTDA LVDLQRTFFA LSRSGVILPS ERDRLTTIAR DLNFRERSLA AVFRAAGRAP DRSGELRAQI IGQKRRDALD ALRKAPVLLA QHRQAHRADG WIATNTFLRD LEAGGIDSNL VNTYKLKP
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