Gene Smed_1935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1935 
Symbol 
ID5322794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1988141 
End bp1988584 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content62% 
IMG OID640790873 
Productputative signal peptide protein 
Protein accessionYP_001327604 
Protein GI150397137 
COG category 
COG ID 
TIGRFAM ID[TIGR02594] conserved hypothetical protein TIGR02594 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTTG TCGCGCTTCT GACTGCAGCA TTTGTCGCCC TTATGTCACC GGAGACCGTT 
TCAGCGGGAA TGCTGACCCA GGCGCAGCAA TATTCCGGGC TGCACGAGGT GAAAAACAAC
AGGCGTCTGC GTGCCGCCCT CGGCATCAAT CCGGCACGCA CGCCCTGGTG CGGCCATTTC
ATGGGGATGG TCGCCCGAAA GGCCGGCCGG CAGCCACCGA AAAGCTATGG CATCGCCCGC
TCGTGGTTGA GCTTCGGCGC ACCGGTCAAG CTTTCCTACG CGCGCCCAGG TGATGTCGTC
GTCGTCAGGG CCGGACGGAG CTATCACGTC GGCGTATTGT CGCAGATTTC CAAGTCGACC
GCACGTCTCA TCGGGGGCAA CCAGTCGGGC CGCGTGCAGC TGTCCTATTT CAGCCGCGCT
CAGGTGGTGG CGGTCAGAAG ATAG
 
Protein sequence
MKLVALLTAA FVALMSPETV SAGMLTQAQQ YSGLHEVKNN RRLRAALGIN PARTPWCGHF 
MGMVARKAGR QPPKSYGIAR SWLSFGAPVK LSYARPGDVV VVRAGRSYHV GVLSQISKST
ARLIGGNQSG RVQLSYFSRA QVVAVRR