Gene Smed_1887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1887 
Symbol 
ID5322745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1955636 
End bp1956673 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content64% 
IMG OID640790824 
Producthypothetical protein 
Protein accessionYP_001327556 
Protein GI150397089 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTGG ACGAGTTGCT GTCCACCTAT GAGCCGCGCC TTGCCGCGGC ATTTCGAGAA 
GCGATCGAGA CGATCAAGTC GACGGCTGTT CTCGCCCGCG TGGTCGAGCG TCTCGATCGT
GGTGACGTTA ACGGTGCTGT TGAGGCCATG CAAATCGAGC CCGAGGCGTT CTCCGCGCTT
GAAATCGCGC TGCAGGAGGC ATTCAACGCC GGCGGCACCA ATGCTGTCGG CGAGTTGCCG
AAGGTCATGG ACCCACAGGG CAATCGCGTG ATTTGGCGTT TCGGCGTCCG CAACCCTGCT
GCCGAGGCGA TCCTGCGACA CCTATCCTCG ACGATGGTCA CGCACATCAC CGATGACCAG
CGGCAGGGCA TCCGCCAGGC GCTGGAGCAG GGGCTTGCCA GAGGCGCCAG CCCGAGATTG
ACTGCACTCG ATGTTGTCGG CCGGCAGAGC CGTGTCACCG GCCGCCGAGA GGGCGGTGTG
ATCGGTCTGA CCCGATACCA GATAGAGTTC ATCGAGCGGG CGCGCCTGCA TCTTGCTTCC
GGCGACGCGG AGCAGATGAA CCGGTACTTC GAGCTCAAGA CGCGCGACAA GCGCTTCGAC
AGGACCGTCA TGGCCGCGGT TAGGGCGGGC AAGCCGGTCA CCGGCGAGGC CCTCACCAAG
ATAGTTGGCC GGTTGCGCGA CAAGAACCTG CTTCTCCGCG GCGAGATGTT GGCGCGGACC
GAAACGATGA TGGCGCTCAG CTCCGCCCGC GACGAGACAA TGCGGCAGCA GATCGAGGCA
GGCAAGGTCG AAGCACGGGA TATCACGAAG GTATGGCGGT CCGCCGGCGA CAGCCGTGTG
CGGCACACCC ATCGTGTCCT CAACGGCAAG AGCGTCGGGA TGGATGAGGT ATTTCAGAGC
CCATCTGGCG CGCTTCTCCG GTTCCCGGGC GACCCGCGCG CGCCGATATC GGAGATTTCC
GGCTGCCGGT GCAGGCTCGA ATACAAGGTG GATCACATCG GTGCGGTTGT GCGCCGGTAC
CGGGCAGAGG TCGTATGA
 
Protein sequence
MTLDELLSTY EPRLAAAFRE AIETIKSTAV LARVVERLDR GDVNGAVEAM QIEPEAFSAL 
EIALQEAFNA GGTNAVGELP KVMDPQGNRV IWRFGVRNPA AEAILRHLSS TMVTHITDDQ
RQGIRQALEQ GLARGASPRL TALDVVGRQS RVTGRREGGV IGLTRYQIEF IERARLHLAS
GDAEQMNRYF ELKTRDKRFD RTVMAAVRAG KPVTGEALTK IVGRLRDKNL LLRGEMLART
ETMMALSSAR DETMRQQIEA GKVEARDITK VWRSAGDSRV RHTHRVLNGK SVGMDEVFQS
PSGALLRFPG DPRAPISEIS GCRCRLEYKV DHIGAVVRRY RAEVV