| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1880 |
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| Symbol | |
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| ID | 5322738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1950684 |
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| End bp | 1952780 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640790817 |
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| Product | hypothetical protein |
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| Protein accession | YP_001327549 |
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| Protein GI | 150397082 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.384763 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGATG TCGCTACGCT CGGACTGCAG GTTGAAAGTG GCTCCGTCGA GAAGGGGGCC
GACGCCCTCA ATCAGCTGAC GGGAGCGGCC GCCCGCGCAG AAGCAGCCGC AAACGGGCTG
TCTGGGGCAA ATCGTGGAGC AACTGGTGCG GCTTCTGCTG CCGCAAAGGC TTACGCCGCC
GAGGGGGCGG CCGCCGCGTC GGCATCGAAA CAGATCGAGA TGATGAACCG CGCGGCCAAT
CAGAACCGCG CATCGTCGCG CGGCAATCTT GGAAATATAG CCGCTCAATT CCAAGACATT
GCCGTCAGTG CGCAAATGGG GATGGGTCCG CTGCAAATTG CCCTTCAGCA AGGCACGCAG
TTGGCCGCGG TGCTTTCATC CATGGAGAGG CCGGTCCAGG GACTAGGTGC GGCCTTTTTG
TCGGTGCTCT CGCCTGTCAG TCTCCTTACG ATCGGCATAA TCGCGCTGGC AGCCGCTGGC
CTGCAGACGG TTGATTGGGC AAAGCTCGCT CAATCGGCGC TGATCGCCTT GGCGGACGTT
CTCGAAACGA TCGCACCGTA CGCCGTCGCA GCTGCGGCGG CGCTAGCGTT GATCTATGCG
CCCGCGATCG TTGGCGGCAT CATCTCGTTG ATCGCGCTGC TCGGTCGATT GGTAGTCCAG
CTTGGTATTG TCGCGGGAGC TTTCATTCTG GCGAACCCTG CCGTCGCATT CGTCGCCGGT
ATCACGGCGG CGATAGCGGC GGCCAACATC TTCCGCGACG AACTCGCACA GATCTTCGGG
CGAGATATCG TGCAAGATGC CAAGAACGGC GTGAACTTTG TCATTGGTGC ATTCGTTGGC
GCATACGAAG CGATCAAAGC CACGTGGTCG CTGCTGCCGA GCGCACTTGG CGACATCGTG
TATTCGACGG CTCAGAACGT GATTGATGGC ATCGAGAGCA TGGTACAGAC CGCTATCGAC
GCTTTGAACA ATTTGACTAA TAAATACGCA CTATGGACCG CGTCCATCGG CAAGCCACTC
AGTCCAGAAG CTTACAACAA TATGATCCTT GGACCGGTTG AGTTCGGCAG CATCAGCAAT
CCTTATAAAG GTTCGGCGGG TGCAGCGGCG AAAGCCGCCA AAGCGGCCTT TGCGGACGCC
CAAGGCACTG ACTTCGCCGG CGAGGGTCTC CGCATCATCG GCGAGTACGC GTCGACGGCG
GCCGGAAAAA TCAAGGAGCT CGTCAAGGGC CTCATCGAAG TCGACGAGAA ATCGAAGAAG
CGCACCGGCG GCAAGAGCGA GCAGGAGAAG TACGCCGACA TCGTTGCAGG AGCCGAGCGC
CAGATCGCAG CGCTTGAGGC GGAGCGTGAT GCTATCGGGC TCACGGAGCA GGCGGCAGCC
GCGCTTCGCT ACGAGACGCA GCTTCTCAAC GAGGCCCAGC AGCGCGGCAT CTCCCTCACA
GATGCACAGA AGAGCGAGCT TTCGTCCCTT GCACGGGTCA TGGCCTCGAT CGAGGAAGAG
ACCCGCCAGA TGGGTGTCGC GCTCGATTTT GCTAAAGAAG TAACCGGAGG CTTCTTCGAT
GACTTCTTCG CGGGAATTGA GAACGGCAAA TCGGTATGGG AGTCTTTCGG CGACGCGGCT
TTGGGGGTGC TCGACCGCAT CGCCGACAAA CTGCTGAACG ACGTCCTCGA TGCCGTGTTT
CAGGTCAGCG GCGCCGGCGC AGGGGCGGGC GGAGGAGGAC TCCTCAGTTG GCTCTTCGGC
GGGGGCCCAA AGGTGGACCC GTGGGCTGGG CTGCGCGGGT ATGCGAACGG AACGAGCTCC
GCTCGACCTG GCGTCGCATG GGTTGGTGAA AAGGGGCCGG AGCTCGTCCG TTTCAAGGGT
GGCGAGGAGG TCATTCCGAA CCATCACCTT CAACGACCGG CCAATGGGAA CGTGGCGCCA
TCGGGCGGTC AGCTAAACCA GAATGGGCCG CGCGAGATCA TCCTTCGGGT GATTGCTGAG
GAGGGGCCGA TGTTCAGGCC CGTCATTCGG TCGGAGAGCC GAGGCGTCTC CGTCGAGACC
GTAAAACAGT ATGACGTGGC GAAGGCAAAC ATCTACCAAA ACGGCGAAGA CCGCTAA
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| Protein sequence | MADVATLGLQ VESGSVEKGA DALNQLTGAA ARAEAAANGL SGANRGATGA ASAAAKAYAA
EGAAAASASK QIEMMNRAAN QNRASSRGNL GNIAAQFQDI AVSAQMGMGP LQIALQQGTQ
LAAVLSSMER PVQGLGAAFL SVLSPVSLLT IGIIALAAAG LQTVDWAKLA QSALIALADV
LETIAPYAVA AAAALALIYA PAIVGGIISL IALLGRLVVQ LGIVAGAFIL ANPAVAFVAG
ITAAIAAANI FRDELAQIFG RDIVQDAKNG VNFVIGAFVG AYEAIKATWS LLPSALGDIV
YSTAQNVIDG IESMVQTAID ALNNLTNKYA LWTASIGKPL SPEAYNNMIL GPVEFGSISN
PYKGSAGAAA KAAKAAFADA QGTDFAGEGL RIIGEYASTA AGKIKELVKG LIEVDEKSKK
RTGGKSEQEK YADIVAGAER QIAALEAERD AIGLTEQAAA ALRYETQLLN EAQQRGISLT
DAQKSELSSL ARVMASIEEE TRQMGVALDF AKEVTGGFFD DFFAGIENGK SVWESFGDAA
LGVLDRIADK LLNDVLDAVF QVSGAGAGAG GGGLLSWLFG GGPKVDPWAG LRGYANGTSS
ARPGVAWVGE KGPELVRFKG GEEVIPNHHL QRPANGNVAP SGGQLNQNGP REIILRVIAE
EGPMFRPVIR SESRGVSVET VKQYDVAKAN IYQNGEDR
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