| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1862 |
|---|
| Symbol | |
|---|
| ID | 5322720 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 1934795 |
|---|
| End bp | 1935133 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640790799 |
|---|
| Product | thioredoxin domain-containing protein |
|---|
| Protein accession | YP_001327531 |
|---|
| Protein GI | 150397064 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | [TIGR01068] thioredoxin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.285789 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.361729 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACTG CTCCAAACGA GCACCCCACG GATGGGAAAG TCGACACTTG CACTTTCCCG
GAAGAAGTTC TGAATTCGCC CCTACCGGTC GTCGCCGCCT TCTCGGGAGA TCGTTGCCTG
CCGTGCGACG CGGTTGCATT CAGCCTCAAA CAAATCGCCA CCGAGCTTGC TGGCAAGGTC
AAGGTGGTCA AGATCGACGT CGACGAGAAC CTCGATCTCG CGGCGCAGTA TGGCGTACGC
GAGGTTCCGA CGCTTCTCAT GTTCAAGGGT GGTGAAGTCG CCGACATCTA CGTCGGAACC
GGCTCACTCC GCTCATGGAT TTCGGAGGCG CTGGCTTGA
|
|---|
| Protein sequence | MPTAPNEHPT DGKVDTCTFP EEVLNSPLPV VAAFSGDRCL PCDAVAFSLK QIATELAGKV
KVVKIDVDEN LDLAAQYGVR EVPTLLMFKG GEVADIYVGT GSLRSWISEA LA
|
|---|
| |