| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1859 |
|---|
| Symbol | |
|---|
| ID | 5322717 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 1932386 |
|---|
| End bp | 1933357 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640790797 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001327529 |
|---|
| Protein GI | 150397062 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.174959 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.394325 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTCAC GCTACGAGAC GTATAAGCTC ACGGCGCGTG TCCGCAGGCG GAAACGGTCG
ATCGAAATGT CGTGCCTGAC GGAGGGTGGC CAGAGACCGC TCGGCACTAG CGACATTCCA
CTTGTGTTCA ATACGCACAA CGACCGAAAA TTGCTGCCGG CCTTTCTTGC GCATTACCGA
AGGCTCGGCG TCTCCCGATT TATCTGCGTC GACGACGTAT CGTCGGACGG AACGCGGGAC
TATCTGCTCG CGCAGGCGGA TGTGGACCTT TGGGCTTCGC CGGTACGCTA TCGGGATGCC
CGCAGAGGGC GTGAATGGCG CGAGGCTCTG TTCGAGCGCT ATGGCGGGAG CCGCTGGTTT
CTGAATGTCG ATTCGGACGA GTTCCTGATC TATGACGATT GCGAAAACCG GCCGCTTGGC
GACCTTGTTA AGGCGCTGGA GAGCAGGGGC GAGAAGCGTC TTGCCGCCCC CATGCTCGAC
ATGTATCCGA TCGGGCAGCT CGGAGCTGCT TCACTCGACG GCGATGACGG CTGGATGCCT
TGGGAAATCG CCGATCATTT TGATGGCTCA GGATACGAGA TGAGCTATAC GAAGCGGGCG
ATCAGCATCA CCGGCGGCCC GCGGAAGCGC AAATTCGCCC ATCTGCTCGA ACTCATGAAA
TATCCTGTCA TCTTCTGGGA CCCGGAATGC AGCCTGGGGG TCAGCATTCA TCAGCCTTTG
CCTTGCGAGC GGAATTTTCC TGCCGTCTCC GGCGTGCTGC TGCACTTCAA ATTCTTCTCC
GATTACAAGG AGAAGATCGA GCGGGCGGTC GCCGAAGGGC AGTATTTCAA TGCTGCGGCG
GCCTATCGCA AGATGCTGGA AGACCTGCAG GAGGCCGGGG AATTCGACTT TTCCCACGAG
AGCTCGACGC GATTCTCGGG GTCCGGGCAG TTGCTCGAAC TCGGATTCAT CGCGCCGGTC
CATTATCCGT GA
|
|---|
| Protein sequence | MLSRYETYKL TARVRRRKRS IEMSCLTEGG QRPLGTSDIP LVFNTHNDRK LLPAFLAHYR
RLGVSRFICV DDVSSDGTRD YLLAQADVDL WASPVRYRDA RRGREWREAL FERYGGSRWF
LNVDSDEFLI YDDCENRPLG DLVKALESRG EKRLAAPMLD MYPIGQLGAA SLDGDDGWMP
WEIADHFDGS GYEMSYTKRA ISITGGPRKR KFAHLLELMK YPVIFWDPEC SLGVSIHQPL
PCERNFPAVS GVLLHFKFFS DYKEKIERAV AEGQYFNAAA AYRKMLEDLQ EAGEFDFSHE
SSTRFSGSGQ LLELGFIAPV HYP
|
|---|
| |