Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1810 |
Symbol | |
ID | 5322668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1892794 |
End bp | 1893345 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640790748 |
Product | hypothetical protein |
Protein accession | YP_001327480 |
Protein GI | 150397013 |
COG category | [R] General function prediction only |
COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00210295 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAGGTTC GTGATTTTTT CCGCTTGTGG CTTTGGGTCC GGTCGCGCGG GCGCATTTCA ATCGGCCCCA AATGTCGTAT CGAGCGCGGG GCTGTTCTGG ATTTACGTGA GGCGGGGAGG ATCACGGTTG GTCGGAAATG TCGCCTACGG AGGGGCTCCA TGCTCATTCC GTATGGCGGA GTTATCAGCA TCGGAGACGA TTTCAGCTTA AACCCCTATT CTGTGCTGTA CGGGCATGGC GGCCTGAGTA TTGGCAACAG TGTGCGCATC GCAGCGGGGT GCGTCATCAT TCCGGCCAAT CATGTTTTCA GTGACCCTGG CACGGCCATT CGCGCTCAGG GGCTGACGAA GCTTGGCATC GTCATTGAGG ACGATGTCTG GGTCGGGGCC AACGTCACTA TTTTGGATGG AGCACATATC TCTCGCGGGT GTGTAATTGC CGCCGGCTCC GTCGTCCGGG GCCAGACGGA ACCTTTGGGC ATCTACGCCG GTGTCCCGGC CAAGCTCATC AGGAAACGCG GAAGAATCGA GACGAGGGAG GTCGCGCAAT GA
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Protein sequence | MQVRDFFRLW LWVRSRGRIS IGPKCRIERG AVLDLREAGR ITVGRKCRLR RGSMLIPYGG VISIGDDFSL NPYSVLYGHG GLSIGNSVRI AAGCVIIPAN HVFSDPGTAI RAQGLTKLGI VIEDDVWVGA NVTILDGAHI SRGCVIAAGS VVRGQTEPLG IYAGVPAKLI RKRGRIETRE VAQ
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