Gene Smed_1810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1810 
Symbol 
ID5322668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1892794 
End bp1893345 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content59% 
IMG OID640790748 
Producthypothetical protein 
Protein accessionYP_001327480 
Protein GI150397013 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00210295 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGGTTC GTGATTTTTT CCGCTTGTGG CTTTGGGTCC GGTCGCGCGG GCGCATTTCA 
ATCGGCCCCA AATGTCGTAT CGAGCGCGGG GCTGTTCTGG ATTTACGTGA GGCGGGGAGG
ATCACGGTTG GTCGGAAATG TCGCCTACGG AGGGGCTCCA TGCTCATTCC GTATGGCGGA
GTTATCAGCA TCGGAGACGA TTTCAGCTTA AACCCCTATT CTGTGCTGTA CGGGCATGGC
GGCCTGAGTA TTGGCAACAG TGTGCGCATC GCAGCGGGGT GCGTCATCAT TCCGGCCAAT
CATGTTTTCA GTGACCCTGG CACGGCCATT CGCGCTCAGG GGCTGACGAA GCTTGGCATC
GTCATTGAGG ACGATGTCTG GGTCGGGGCC AACGTCACTA TTTTGGATGG AGCACATATC
TCTCGCGGGT GTGTAATTGC CGCCGGCTCC GTCGTCCGGG GCCAGACGGA ACCTTTGGGC
ATCTACGCCG GTGTCCCGGC CAAGCTCATC AGGAAACGCG GAAGAATCGA GACGAGGGAG
GTCGCGCAAT GA
 
Protein sequence
MQVRDFFRLW LWVRSRGRIS IGPKCRIERG AVLDLREAGR ITVGRKCRLR RGSMLIPYGG 
VISIGDDFSL NPYSVLYGHG GLSIGNSVRI AAGCVIIPAN HVFSDPGTAI RAQGLTKLGI
VIEDDVWVGA NVTILDGAHI SRGCVIAAGS VVRGQTEPLG IYAGVPAKLI RKRGRIETRE
VAQ