Gene Smed_1809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1809 
Symbol 
ID5322667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1892013 
End bp1892714 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content50% 
IMG OID640790747 
ProductFkbM family methyltransferase 
Protein accessionYP_001327479 
Protein GI150397012 
COG category 
COG ID 
TIGRFAM ID[TIGR01444] methyltransferase, FkbM family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00198862 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAGGC TCGCACGCTC ATTGCGCAAG AAGTATCGCT ATCTCGTGGA CGCCAGGACC 
GTCACAATTG ATGGCGTTAC TCTTATTTCG GACAAAGGAC GGATACCGCA CTATCTCCGG
GATTTGATGT ACCGCGAAGT GTATGAGGAC ACAGAGCGAA ACGTTCTCCT AAAGATATTA
AAGCCGGGGC ACAGAGTTGT GGAGTTCGGC ACCGGTCTCG GGTTTATTTC GCTCTTGGCA
GCAAAAATTT GTGGTCCAGA AAAGGTCAAC ACTTACGAGG CCAATCCCAC TATCGAGGCT
CTTATCCGAG AGAACTTCCA ACTCAACCGC GTTAATCCTT GCCTTCACAT GGCTGCTGTG
ACACGTGACG GTCGCCGGTT ATTATTCAAC GCTTCGGACA ACATCATTTC GTCAAGCGCT
TTCGACCGGG GGATTAGCGG AAAAATGATA GAGATCGAAA GCATACCTTT CGCCGATGTC
TTGCGAAGCC ATTCACCGGA CGTGTTGGTT ATGGACGTCG AGGGTGGCGA GCATGAGCTG
CTGATGTCGG ATGGTCTGGC TGCGATCAGA CATATTCTCG TGGAGCTCCA CCCGCATATC
ATCGGTCAGG AGAAGGTGGA TGAAATCAGA AACCATCTTG TTTCCAAGGG ATTTGTTGCC
GAAACCCAAG ACAGAAAGAC GTTTCATTTT CATAGGATCT AA
 
Protein sequence
MKRLARSLRK KYRYLVDART VTIDGVTLIS DKGRIPHYLR DLMYREVYED TERNVLLKIL 
KPGHRVVEFG TGLGFISLLA AKICGPEKVN TYEANPTIEA LIRENFQLNR VNPCLHMAAV
TRDGRRLLFN ASDNIISSSA FDRGISGKMI EIESIPFADV LRSHSPDVLV MDVEGGEHEL
LMSDGLAAIR HILVELHPHI IGQEKVDEIR NHLVSKGFVA ETQDRKTFHF HRI