| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1792 |
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| Symbol | |
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| ID | 5322650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1874699 |
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| End bp | 1875670 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640790730 |
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| Product | cation diffusion facilitator family transporter |
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| Protein accession | YP_001327462 |
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| Protein GI | 150396995 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1230] Co/Zn/Cd efflux system component |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.595917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.007542 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGATA TCCATTCACC GGCGCCTGCC GCCCACGATC ATGTGTTTCT CGGCGACAAT
CACCAGCGCA ATGAAAGGCG AACGTGGTTC GTCATTGCGC TCACCGCGGG AATGATGGTC
GCGGAAATCG CCGCGGGTAC CTTCTACGGC TCGATGGCTC TGGTCGCCGA CGGCTGGCAC
ATGTCGACGC ATGCTGCAGC TCTGCTGATT GCGGCGCTCG CCTATCTCTA TGCGCGGCGA
AACGCCCGCA ACCCCCGGTT TACATTCGGT ACCGGCAAAC TCGGCGACCT TGCTGGTTTT
TCCAGTGCGA TCGTACTTGC CCTGATCGCT CTGCTCATCG GCTGGGAAAG TCTTCTCCGG
CTGGCCAATC CGGTGGCGAT CAGTTTTCCG CAGGCCATTT CGGTAGCCGT GCTTGGGCTT
GTGGTCAATC TCGTCTGTGC CTGGCTGCTT CGCGAGGACC ATTCGCATCA CCACCATGGT
CACCATCACC ACCACGGCCA CGGGCACGAT CACGATCACG GACACCACCA CACCGCCGCC
CAAGCCCGGG ACAACAACCT GCGTGCCGCC TATCTGCATG TGCTGGCGGA TGCGCTGACC
TCGGTTCTTG CGATTGTCGC GCTCGCAGCC GGCAGCGTCT ACGGCTGGAT ATGGCTCGAC
CCGCTGATGG GTATTGTCGG CGCTCTGGTG ATTGCCCGCT GGTCCATGGG GCTGATCCGG
GATAGCGGCA GCGTGCTGCT GGATTATATC CAGGCGGGCG AGGATCTGCC GGACGAGATA
CGTGCGGTAA TCGAAAAGGA CGGGGATCGG ATTACGGATC TGCACGTGTG GCAGCTTGGG
CCCGGTCACC ATGGCGCCAT CGTTTCGCTG GTGACGAAAA ACCCGCAGAG CCCGTCGATC
TACCGCCGGA AGCTTCAGCA TATCCACGAG CTTTCACATG TGACGGTCGA GGTCGAGCCT
CTGGCTGCGT GA
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| Protein sequence | MTDIHSPAPA AHDHVFLGDN HQRNERRTWF VIALTAGMMV AEIAAGTFYG SMALVADGWH
MSTHAAALLI AALAYLYARR NARNPRFTFG TGKLGDLAGF SSAIVLALIA LLIGWESLLR
LANPVAISFP QAISVAVLGL VVNLVCAWLL REDHSHHHHG HHHHHGHGHD HDHGHHHTAA
QARDNNLRAA YLHVLADALT SVLAIVALAA GSVYGWIWLD PLMGIVGALV IARWSMGLIR
DSGSVLLDYI QAGEDLPDEI RAVIEKDGDR ITDLHVWQLG PGHHGAIVSL VTKNPQSPSI
YRRKLQHIHE LSHVTVEVEP LAA
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