Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1762 |
Symbol | |
ID | 5322620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1844498 |
End bp | 1845382 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640790700 |
Product | hypothetical protein |
Protein accession | YP_001327432 |
Protein GI | 150396965 |
COG category | [S] Function unknown |
COG ID | [COG4254] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.426629 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0904839 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGACT TGCGTCGTGT CGCAGTCGCT GCGTTGGGGG CAGCGCTTTA CGGTTCCACA CCGACAATTG CGGCCGAACC AGTTGGAGAG GCGGTCCGAA TCAGGACCTC GGTCACCGGC AGCGGTGGAC CGATCGCGGA GCGGGACGCC GTTCATCGTG ATGAGCGAAT AAGCACGTCC AGATCGGGCC TCGGTCAATT CGTGTTCCGC GACGGCAGTA AATTGGCAGT GGGAGCCGGC TCTTCCGTCG TCATCGACAA CTTCGTCTTC GACGACGCAA AAACCGTACA GAAACTGACC GTCGCCGCTG CCAAGGGAAC GTTCCGATGG ATCAGCGGGA ATTCGAAGCA CTCGGCCTAT CAGATCCTGA CGCCGGCCGG AACGATCGGC GTACGCGGAA CCGTTTTCGA TTTCTACATC GGCAAGGATG GAACGACAGC GATTGTTCTT TTGGAGGGGG CGGCCCGATT CTGCGGCCCG GCGGGGTGTC AGCAACTCAC GCGCCGCTGC GATTGCGTGA TCGCAAAACG CGACGGCACC ATGACGGACA CGCATAGAGC CGGGCGCAGC ACGCTTTCGA CGCTCGGCAA CCGTAAAGCC CTTCCCTTCC TTTCAGGCGA TCAAAAACTG TCCGCCTCCT TCGGGAGCAT GAGCGGCAGT TGCGGAATTT CTGCGGCAAT CGAGATCAAG CCGACAGCTC CGCACCGGGC ACGCCCGCCG GAAAGAGCAA CCCCGCAGAA GGCGCGCCCG GGCAAGACGC GCAGCAACGA GCCCGGTAAA CGAGGTCTCG ACAAGGGAAA GAAGGGACAA GATTCGGGGA AAAAGGGGCA GGACACCGGC AAGAAAGGCC AACTGGATAC CGGTACGAAG AAGGGCCGCG GCTGA
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Protein sequence | MFDLRRVAVA ALGAALYGST PTIAAEPVGE AVRIRTSVTG SGGPIAERDA VHRDERISTS RSGLGQFVFR DGSKLAVGAG SSVVIDNFVF DDAKTVQKLT VAAAKGTFRW ISGNSKHSAY QILTPAGTIG VRGTVFDFYI GKDGTTAIVL LEGAARFCGP AGCQQLTRRC DCVIAKRDGT MTDTHRAGRS TLSTLGNRKA LPFLSGDQKL SASFGSMSGS CGISAAIEIK PTAPHRARPP ERATPQKARP GKTRSNEPGK RGLDKGKKGQ DSGKKGQDTG KKGQLDTGTK KGRG
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