Gene Smed_1762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1762 
Symbol 
ID5322620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1844498 
End bp1845382 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content61% 
IMG OID640790700 
Producthypothetical protein 
Protein accessionYP_001327432 
Protein GI150396965 
COG category[S] Function unknown 
COG ID[COG4254] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.426629 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0904839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGACT TGCGTCGTGT CGCAGTCGCT GCGTTGGGGG CAGCGCTTTA CGGTTCCACA 
CCGACAATTG CGGCCGAACC AGTTGGAGAG GCGGTCCGAA TCAGGACCTC GGTCACCGGC
AGCGGTGGAC CGATCGCGGA GCGGGACGCC GTTCATCGTG ATGAGCGAAT AAGCACGTCC
AGATCGGGCC TCGGTCAATT CGTGTTCCGC GACGGCAGTA AATTGGCAGT GGGAGCCGGC
TCTTCCGTCG TCATCGACAA CTTCGTCTTC GACGACGCAA AAACCGTACA GAAACTGACC
GTCGCCGCTG CCAAGGGAAC GTTCCGATGG ATCAGCGGGA ATTCGAAGCA CTCGGCCTAT
CAGATCCTGA CGCCGGCCGG AACGATCGGC GTACGCGGAA CCGTTTTCGA TTTCTACATC
GGCAAGGATG GAACGACAGC GATTGTTCTT TTGGAGGGGG CGGCCCGATT CTGCGGCCCG
GCGGGGTGTC AGCAACTCAC GCGCCGCTGC GATTGCGTGA TCGCAAAACG CGACGGCACC
ATGACGGACA CGCATAGAGC CGGGCGCAGC ACGCTTTCGA CGCTCGGCAA CCGTAAAGCC
CTTCCCTTCC TTTCAGGCGA TCAAAAACTG TCCGCCTCCT TCGGGAGCAT GAGCGGCAGT
TGCGGAATTT CTGCGGCAAT CGAGATCAAG CCGACAGCTC CGCACCGGGC ACGCCCGCCG
GAAAGAGCAA CCCCGCAGAA GGCGCGCCCG GGCAAGACGC GCAGCAACGA GCCCGGTAAA
CGAGGTCTCG ACAAGGGAAA GAAGGGACAA GATTCGGGGA AAAAGGGGCA GGACACCGGC
AAGAAAGGCC AACTGGATAC CGGTACGAAG AAGGGCCGCG GCTGA
 
Protein sequence
MFDLRRVAVA ALGAALYGST PTIAAEPVGE AVRIRTSVTG SGGPIAERDA VHRDERISTS 
RSGLGQFVFR DGSKLAVGAG SSVVIDNFVF DDAKTVQKLT VAAAKGTFRW ISGNSKHSAY
QILTPAGTIG VRGTVFDFYI GKDGTTAIVL LEGAARFCGP AGCQQLTRRC DCVIAKRDGT
MTDTHRAGRS TLSTLGNRKA LPFLSGDQKL SASFGSMSGS CGISAAIEIK PTAPHRARPP
ERATPQKARP GKTRSNEPGK RGLDKGKKGQ DSGKKGQDTG KKGQLDTGTK KGRG