| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1743 |
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| Symbol | cobD |
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| ID | 5322601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1822851 |
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| End bp | 1823804 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640790681 |
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| Product | cobalamin biosynthesis protein |
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| Protein accession | YP_001327413 |
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| Protein GI | 150396946 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.22977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.192923 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACTGC TTTTGGATCG CCTCATTGGC GATCCGGACT GGCTCTGGTC GCGGATCACG
CATCCCGTGG TGTTTTTCGG CCAGGCGATC GGGTTCGTCG AAAAGGCCCT GAACACCGGA
GAGGTTGCCA ATACCTGGCT GAAGGTGCGC GGCGCGGTCG GTATTCTGAT GCTGCTCGCC
GCAGCCATCG GCTCAGGTAT CGTGCTTGCC CGGCTCTTCG ATGTGCTTGG CGCCCTCGGC
TCGTTGCTCG AAGTTGTCAC CGTTGCCATC TTCCTCGCGC AAAAGAGCCT CGCGGATCAC
GTTTCCAGGG TTGCCGTCGG TTTACGTCGC GGTGGAGTTT CGGGCGGCCG CAAAGAAGTG
TCCATGATCG TCGGACGCGA TCCGAGCACG CTCGACGAGC CCGGGATATG CCGCGCAGCA
ATCGAAAGCC TGGCTGAGAA TTTTTCGGAC GGCGTCGTTG CTCCGGCATT CTGGTATGCA
ATTGCTGGTC TGCCCGGTCT TCTGGCCTAC AAGATGCTGA ACACGGCCGA TTCGATGATT
GGCCACAGAA GCCCGAAATA TCTTCGCTTC GGTTGGGCAT CGGCGCGGCT CGACGATCTG
GCGAACCTGC CCGCCGCAAG GCTCTCGGCA CTCCTGATCG CCGCCGGGGC CTATTTCAAG
TGCGGTGAAG AAGAGGCAAA AAACGCGATA CGGGTGGCGC GGCGCGATCA CGGGTTTCAC
CGTTCGCCAA ATTCCGGATG GCCGGAGGCC GCGATGGCCG GCGCCATCGG CATTCAGCTT
GCCGGTCCGA GAGTCTATGG CGGCGTAAAG GTGGACGAGC CCATGATGAA CGCCGCCGGT
CGTGCGGCCG CAGCCATCGA GGATATCGAC GCTGCCGTCA CTGTCTTCTA TGCGGCCTGC
CTGGTGATGA CGTCTGCCTT TGCCTTCGGT TTTCTGCTTC TGGCGGCTCT ATAG
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| Protein sequence | MALLLDRLIG DPDWLWSRIT HPVVFFGQAI GFVEKALNTG EVANTWLKVR GAVGILMLLA
AAIGSGIVLA RLFDVLGALG SLLEVVTVAI FLAQKSLADH VSRVAVGLRR GGVSGGRKEV
SMIVGRDPST LDEPGICRAA IESLAENFSD GVVAPAFWYA IAGLPGLLAY KMLNTADSMI
GHRSPKYLRF GWASARLDDL ANLPAARLSA LLIAAGAYFK CGEEEAKNAI RVARRDHGFH
RSPNSGWPEA AMAGAIGIQL AGPRVYGGVK VDEPMMNAAG RAAAAIEDID AAVTVFYAAC
LVMTSAFAFG FLLLAAL
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