| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1730 |
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| Symbol | |
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| ID | 5322588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1810668 |
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| End bp | 1811729 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640790668 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001327400 |
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| Protein GI | 150396933 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0821566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGACA AGACGAAAAA CAGAGCGACG ATGGCGCCGC CGGCCGAAGG CGGCAGGCCG
ACACTGAAGA CGATCGCTTT CATGACCGGG CTCGGTATTA CCACCGTCTC GCGCGCTCTG
AAGGACGCTC CCGATATAGG CGCAGAAACC AAGGAACGCG TGCGTCTCGT CGCAAAACAG
ATCGGCTATC AACCGAATCG CGCGGGCGTT CGCCTCAGAA CGGGCAAGAC GAATGTCATT
AGTCTGGTGC TGACTCTGGA GGAAGAGATC ATGGGCATCA CCAGCCCCAT GGTCATCGGC
ATCACCGAAA TCCTTGCCGG CACCCAATAT CACCTGGTTG TGACACCCTA TAGTTCAACC
AAGGATCCGC TCGGCCCCAT CCGCTATATT CTCGACACCG GCGCAGCCGA TGGCGTGATC
ATTTCGCGTA CCGAACCCAA CGACCCGCGG GTAACGCTTT TAACCGAGCG TCACCTGCCC
TTCGCCACCC ACGGGCGTAC CGAGATGGGC CTGATCCATC CCTATCACGA TTTCGACAAT
GAGCGCTTCG CCTACGAGGC CGTCCGCAAG CTCGTCGACC GCGGCAGGCG GCGGCTGGTG
CTCCTGGAGC CACCGCCGAA TCTAACTTTC CACACCCATA TGCGCACCGG CTTCGAGCGG
GGGCTGCGGG ATTTCGGAGC GGAATCGGTG AGCTTTCATC AGGTCAATAT CGACTACAGC
CTCGTCGCCA TTCGCGATGC GTTCGAGAGG CTTATGCACT CTTCGGATGC CCCGGACGGC
ATCGTTTCCG GCAGTGGATC CGGCGCCATC GCGCTGATCG CGGGCGTCGA GGCGGCCGGC
AAGAAGGTCG GCGATGACGC CGACATGGTC TCCAAAGTGC CGAGCGATTT CCTGCGCTGG
CTCCGGCCGG AGGTGATGAC GATGTATGAG GATATCCGCA TTGCCGGGCG CGAGCTCGCC
AAGGCAGTGA TCGGCCGCAT CGAAGGCCAC CCGCCGGATA AGCTTCAGAG CCTCAGCCAG
CCCGAATTCC AGCCGCCGGT GGCGGGGCCG GCGAGATTGT AG
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| Protein sequence | MDDKTKNRAT MAPPAEGGRP TLKTIAFMTG LGITTVSRAL KDAPDIGAET KERVRLVAKQ
IGYQPNRAGV RLRTGKTNVI SLVLTLEEEI MGITSPMVIG ITEILAGTQY HLVVTPYSST
KDPLGPIRYI LDTGAADGVI ISRTEPNDPR VTLLTERHLP FATHGRTEMG LIHPYHDFDN
ERFAYEAVRK LVDRGRRRLV LLEPPPNLTF HTHMRTGFER GLRDFGAESV SFHQVNIDYS
LVAIRDAFER LMHSSDAPDG IVSGSGSGAI ALIAGVEAAG KKVGDDADMV SKVPSDFLRW
LRPEVMTMYE DIRIAGRELA KAVIGRIEGH PPDKLQSLSQ PEFQPPVAGP ARL
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