| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1702 |
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| Symbol | |
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| ID | 5322560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1780799 |
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| End bp | 1782067 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640790641 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001327373 |
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| Protein GI | 150396906 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.57478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACGCA TCGATCTCAA AAGAATTTGC AGCGTGGCGG TGATTGCCAT GCTGGCAACG
CCGGCGCTTG GGGAGCCCGT GACCATCGCG GTATGGATGC ATGAACATCC ACCAAGACTG
GCGCTGGACG AGAAGTTGGT CGCCGCATTC GAGCAGGCCA ATCCCGACAT AAATGTCGAC
CTGACCATTT TCCCGAACGC TCAGTTCGAG CAGCGGCTTC AGATTGGATT CGCCAGCGGC
GACGGGCCGG ACCTGTTCAA CAGTGGCTCG TTCAATATCG GGCAATATCG CCATTCCCGA
TTGTTGGCTC CGGTCGATCT GAAGACGGTG GGTGTCGATG ATTTGAATGA ACTCAAGGCG
AAATTCGGGA TCGGCATCGC CGGCGCCGAG TTTGACGGTG TCGCTTACGG ACTGCCGACG
GAGGTGAGCA ATTATGCGTG CGTCGCCAAC AATGCGCTGT GGCGTACGGC GGGGCTCGAT
CCCGCAAAAG ATGCACCGGC CACTTGGGAG GAGATGGTTG AAGTCGCCCG CAAGCTGACC
CGCCGGGATG ACGGAAATGT TCCGGTCGTA CGCGGCTTCG ACTTCAACTG GTCCGACCCG
ATCTTCATGT GGTTGACGTT CAACGCGATG GTGAACCAGC TTGGCGGCAC CGTCATCGAT
GAGGCGGCGT TGACTGCGGA TTTCGACTCG GTTCAGGTCC GCACGGTCAT GGACTTCTGG
AGCGCCTGGG CCAATGATTG GGCACTGGGC GGACCGCAAT ATACCGCGAG CCGCGATGCT
TTTCTGGCTG GCGAACTGGC TACGGAATGC ACCTTCGGCT CATGGGGACG CGATCAGTTC
AAAGCGGCAG GGATCGATTA TACCTTCTTT CCTGTACCGC GCTGGCGTGA AGGAACGGTC
GATACCGGTT TCAACGCCTA TGCCTATTAC ATGATGGTCA ATGCCAATGC CCCGCCGGAA
CGCCAGGAGG CAGCGTGGCG CTTTGCCGCG TTCTATGCGA GCCAGGGCGA GGCCCTCTTC
GAAGAAGCTG GGCTCTTCAC CACGGTGCCG GCAGTCCAGG AGCTGGAAAG CTATACATCC
GATGGTAGTA ACACGATCTT CACCGACGAG CTGGACAAGG CGGTGTTTTC GCCCCGTGTG
CCGGGTTTCA ACGAGCTTGG CGACGCTCTG GCTCGCGCCC GCGACCGGAT CGTTATAAAC
CATGAAGATG CTTCCGCCGC TCTCGGCGAG CTCGAGGCTG AGGCGTCGAC CATTCTCGGA
CGGTTTTGA
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| Protein sequence | MIRIDLKRIC SVAVIAMLAT PALGEPVTIA VWMHEHPPRL ALDEKLVAAF EQANPDINVD
LTIFPNAQFE QRLQIGFASG DGPDLFNSGS FNIGQYRHSR LLAPVDLKTV GVDDLNELKA
KFGIGIAGAE FDGVAYGLPT EVSNYACVAN NALWRTAGLD PAKDAPATWE EMVEVARKLT
RRDDGNVPVV RGFDFNWSDP IFMWLTFNAM VNQLGGTVID EAALTADFDS VQVRTVMDFW
SAWANDWALG GPQYTASRDA FLAGELATEC TFGSWGRDQF KAAGIDYTFF PVPRWREGTV
DTGFNAYAYY MMVNANAPPE RQEAAWRFAA FYASQGEALF EEAGLFTTVP AVQELESYTS
DGSNTIFTDE LDKAVFSPRV PGFNELGDAL ARARDRIVIN HEDASAALGE LEAEASTILG
RF
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