Gene Smed_1694 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1694 
Symbol 
ID5322552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1773899 
End bp1774297 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content60% 
IMG OID640790633 
Productferric uptake regulator family protein 
Protein accessionYP_001327365 
Protein GI150396898 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.924713 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACGC CTCAACTGAC AAAGAACCAG GCGCTGGTCA TGGGGGCACT AACCCATTCA 
GACGGGCCGC TGAGCGCCTA TACCATCCTC GATAAGCTGC GCGACCAGGG ATTTCGCGCA
CCGTTGCAAG TCTACCGCGC GCTCGACAAA TTGCTTGAAT ACGGCCTGGT TCATCGCCTG
GAGAGCCTCA ACGCTTTCGT CGCGTGCGCG TGCCCGCATG AACACGAGCA CGAGCATGGC
GTCACGGCCT TTACCATCTG CGAAGGCTGC GGTCAGGTGA CCGAGCTCCA GGACGAGGTG
ATCGAGGAAC GGCTGTCGAC GCTGGCGCGT GCGCAGGAGT TCAAAACGGA GAAGACGACG
ATTGAAATCC GGGGTCAGTG CAAGAGCTGC GCCATATAG
 
Protein sequence
MATPQLTKNQ ALVMGALTHS DGPLSAYTIL DKLRDQGFRA PLQVYRALDK LLEYGLVHRL 
ESLNAFVACA CPHEHEHEHG VTAFTICEGC GQVTELQDEV IEERLSTLAR AQEFKTEKTT
IEIRGQCKSC AI