Gene Smed_1680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1680 
Symbol 
ID5322538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1762171 
End bp1762464 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content56% 
IMG OID640790620 
Producthypothetical protein 
Protein accessionYP_001327352 
Protein GI150396885 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.124193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.187707 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGC CCGACCCGAT TTCCCACCAG GCCTTTTCGA CATCCTTCCT CCTGTTCGCC 
CAGTATGGCG GCAAGGCGAT CATTCCTGTC GAGGATGTCT GCCGCGACTA TTTCAATCAC
CTTACGCCTG ACAAATTTCT TCGGAAGGTC GGAACTGGCG AAATCGCCCT GCCGGTAGTG
AGGGCGGAGA CGTCTCAGAA GTGCCAGAAG GGCGTCTATT TGCAAGATTT GGCCGATTAT
CTGGATCGGA GGCGCGAGGC GGCACTAAGG GAGTTCCGTC AACTGCACCG ATGA
 
Protein sequence
MKTPDPISHQ AFSTSFLLFA QYGGKAIIPV EDVCRDYFNH LTPDKFLRKV GTGEIALPVV 
RAETSQKCQK GVYLQDLADY LDRRREAALR EFRQLHR