| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1657 |
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| Symbol | |
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| ID | 5322515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1746510 |
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| End bp | 1747415 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640790597 |
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| Product | peptidase S49 |
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| Protein accession | YP_001327329 |
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| Protein GI | 150396862 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.954617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.14225 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGGAACT ATCCCGAAAT CGCCAGTCGG ATGTTCGGCA CGCCGCTGAT GCTGCATCCG
TCGAAGGGCG ACATCATTGC GCGGGCTTTC GGTCCGCGCG TGCTTGGCAG TCCGGACGCT
CCGGCGCACG TCGCCGGCGG CGAAGAGATG GGGCTCCTTG GCGATAAGCT GCGCAATGCG
ACCGACTGGG ACGGAGAGCG CATCTACCCC GGTCCGGATC TTGTCGCGTC CGGCATTGCG
CTCATCGAGA TCGAGGGCTC TCTCGTGAAC AAGGGCAAGT GGATCGGCAA GTCCTGCGGC
ATGACCAGCT ACGAAGCGAT CGGAGTGCAG GTCCGGGATT GCATCGAGCG CGACGACATC
AAGGCCGTCG TGTTCGAGGT CGACAGCTAT GGCGGCGAGG TGACCGGCGC CTTCGATTGC
GCCGAGCTGA TCTTCGAGCT TTCGCAGGTG AAGCCCACCA TCGCGGTCCT CACGGACCAT
GCCTGCTCGG CCGGTTATCT GCTGGCCTCG CCCTGCCGTC AGCTGGTCAT TCCGCAGACC
GGTATTTGCG GCTCGATCGG CGTCATCTCG ATGCATGTCG ATATGAGCGC CTGGCTCGCG
AAGGAGGGCC TGAAGGTCAC CATCCTGAAG GCCGGCGAGC ACAAGGCCGA CTTCAATCCT
TACGAGGCCA TCCCGGACGA TGTGCTTCAG CAGGAACTCG CCGAGCTCGA GGAGCTTCGC
GTCGAATTCG CAGCCACCGT CGCGCGGTAC CGCGCCGGCC GGCTGACACA GCAATCCGCT
CTCGCCACTG AGGCGCGGGT CTATCGCGGA CAGAAGGCGG TTGATGCCGG CCTCGCCGAC
GCGGTTGCAC GCCCTTCGCA GGTTCTCGAA GCCTTCGAAG CTGAACTGAG CCGGACAGCC
GGCTAA
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| Protein sequence | MRNYPEIASR MFGTPLMLHP SKGDIIARAF GPRVLGSPDA PAHVAGGEEM GLLGDKLRNA
TDWDGERIYP GPDLVASGIA LIEIEGSLVN KGKWIGKSCG MTSYEAIGVQ VRDCIERDDI
KAVVFEVDSY GGEVTGAFDC AELIFELSQV KPTIAVLTDH ACSAGYLLAS PCRQLVIPQT
GICGSIGVIS MHVDMSAWLA KEGLKVTILK AGEHKADFNP YEAIPDDVLQ QELAELEELR
VEFAATVARY RAGRLTQQSA LATEARVYRG QKAVDAGLAD AVARPSQVLE AFEAELSRTA
G
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